Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA3010 |
Symbol | |
ID | 3104552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 3192837 |
End bp | 3194108 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637172136 |
Product | hypothetical protein |
Protein accession | YP_115398 |
Protein GI | 53802901 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGCA CACGTGCGGA ACTGATCGAG AAGATTCGCC TGGGCGAGGA CAGCTTCCTG GAACTGGAGG AGGTCAAGTT CGCCGGTGGC AAGCTGCGCG GCCCTGCGCA GGAGGATCTG GCGGACGAAC TGGCCGCCTT TGCCAACAGC GCCGGCGGGG TGCTGCTGCT CGGCGTGGAA GACCGCGCCC GCGAGGTGCT GGGCATTCCG CTGGAGCATC TGGATGCGGT GGAAGCGCGG GTGCGGCAGG CCTGCGAGGA TTCGGTGAAA CCGCCTTTGG CGCCGGTCAT CGAGCGCATG ACGCTGCCCG ATTCGGCGGG GGCGGAGCAG CCGGTGCTGC GGGTGGAAGT GGCGCGCAGT CTGTTCGTGC ACCAGAGCCA GGGAGGGTAC TTCCATCGCG TGGGTTCCTC GAAACGCCCC ATGCCCCCGG ATCATCTGGC GCGTCTGTTC CAGCAGCGCA GCCAGTCGCG GCTGATCCGC TTCGACGAGA CCCCCGTGTC GCGCGCCACG CTCACCGATC TGGACGAGGT GCTGTGGCGG CGTTTCGCGC CGGCCCAAAG CGCTGATGCA CCGGAAGTAC TGCTCGGCAA GCTGGCCATG GCAGCCCAAG ACGAGCAGGA TATTTGGCGG CCGACCGTGG CGGGCCTGCT GATGGCCAGC CGCGAACCGC ACCGCTATCT GCCCGGTGCC TTGATTCAGG CCGTCGCCTA TGCGGGCACC ACCGTCGTTC CCGAGGGAGA ACTGGTCTAT CAGCGCGATG CTCAGGACAT CACCGGGCCG CTGGATGAAC AGGTTCGTAT GGCCTGCGCC TTCGTGCGCA AGAACATGCA GGTGGCCGCG TTCAAGCGTG CCGACGGCGG ACGGGTGGAC ATGCCCCAGT ACGACATGAC CGCCGTGTTC GAGGCGGTGG TCAACGCGGT GGCGCACCGC GACTATTCGA TGGCAGGAGC CAAGGTACGA CTGCGGTTGT TTGCCGATCG GCTGGAGCTG TATTCGCCGG GCATGCTGCC CAACACCATG ACCCCAGAGA GCCTGCCATT CCGGCAGGCC GCCCGCAATG AAGCCCTGAC CAGCCTCTTG GCGCGCTGCC CGGTGGGGGA TGACGAACTG GCGCTGTATC GCAGCCACCT CATGGACAAG CGTGGGGAAG GTGTGTCGAT CATCCTCGCG CGCAGCGAAG CTCTCTCGGG TAAGCGCCCC GAATACCAGA TGAACGATGA CAGCGAGCTG GTTTTGACGA TTTATGCCGC TCGCACGGAG CAAGAAGCAT GA
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Protein sequence | MLGTRAELIE KIRLGEDSFL ELEEVKFAGG KLRGPAQEDL ADELAAFANS AGGVLLLGVE DRAREVLGIP LEHLDAVEAR VRQACEDSVK PPLAPVIERM TLPDSAGAEQ PVLRVEVARS LFVHQSQGGY FHRVGSSKRP MPPDHLARLF QQRSQSRLIR FDETPVSRAT LTDLDEVLWR RFAPAQSADA PEVLLGKLAM AAQDEQDIWR PTVAGLLMAS REPHRYLPGA LIQAVAYAGT TVVPEGELVY QRDAQDITGP LDEQVRMACA FVRKNMQVAA FKRADGGRVD MPQYDMTAVF EAVVNAVAHR DYSMAGAKVR LRLFADRLEL YSPGMLPNTM TPESLPFRQA ARNEALTSLL ARCPVGDDEL ALYRSHLMDK RGEGVSIILA RSEALSGKRP EYQMNDDSEL VLTIYAARTE QEA
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