19 homologs were found in PanDaTox collection
for query gene Franean1_2888 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_2888  regulatory protein TetR  100 
 
 		 203 aa  403  1e-111  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5224  TetR family transcriptional regulator  64.55 
 
 		 207 aa  216  2e-55  Frankia sp. EAN1pec  Bacteria  normal  0.123106  normal  1 
 
 
-
 
NC_008699  Noca_2965  regulatory protein, TetR  33.86 
 
 		 192 aa  89.4  3e-17  Nocardioides sp. JS614  Bacteria  normal  0.400188  n/a   
 
 
-
 
NC_013757  Gobs_2653  transcriptional regulator, TetR family  33.85 
 
 		 199 aa  85.9  4e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0164897  n/a   
 
 
-
 
NC_013530  Xcel_1382  transcriptional regulator, TetR family  32.98 
 
 		 204 aa  83.2  0.000000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.117773  n/a   
 
 
-
 
NC_009921  Franean1_6247  regulatory protein, TetR  32.43 
 
 		 170 aa  59.7  0.00000003  Frankia sp. EAN1pec  Bacteria  normal  0.133866  normal  1 
 
 
-
 
NC_013530  Xcel_2247  regulatory protein TetR  33.33 
 
 		 184 aa  55.5  0.0000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3010  TetR family transcriptional regulator  31.1 
 
 		 218 aa  44.3  0.001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0726  TetR family transcriptional regulator  24.38 
 
 		 201 aa  44.7  0.001  Methylococcus capsulatus str. Bath  Bacteria  normal  0.892311  n/a   
 
 
-
 
NC_013131  Caci_4233  transcriptional regulator, TetR family  37.88 
 
 		 200 aa  43.5  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0221768  normal  0.231095 
 
 
-
 
NC_010552  BamMC406_5273  TetR family transcriptional regulator  26.27 
 
 		 241 aa  43.1  0.003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0264263  normal  1 
 
 
-
 
NC_009077  Mjls_2095  TetR family transcriptional regulator  34.72 
 
 		 222 aa  43.1  0.003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.112478 
 
 
-
 
NC_013739  Cwoe_1216  transcriptional regulator, TetR family  53.19 
 
 		 224 aa  42.7  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.187428 
 
 
-
 
NC_009719  Plav_1125  TetR family transcriptional regulator  29.63 
 
 		 200 aa  42.4  0.004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.849198  normal  1 
 
 
-
 
NC_008752  Aave_2815  TetR family transcriptional regulator  28.17 
 
 		 242 aa  42.4  0.005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.106176  normal  0.623336 
 
 
-
 
NC_010725  Mpop_0360  transcriptional regulator, TetR family  31.76 
 
 		 215 aa  41.6  0.007  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_3540  TetR family transcriptional regulator  26.19 
 
 		 250 aa  41.6  0.008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6288  transcriptional regulator, TetR family  40 
 
 		 237 aa  41.6  0.009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_5008  TetR family transcriptional regulator  50 
 
 		 201 aa  41.2  0.01  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
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