| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3540 |
|---|
| Symbol | |
|---|
| ID | 6245091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 483026 |
|---|
| End bp | 483778 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595318 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001859730 |
|---|
| Protein GI | 186472388 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGATG GCCGTCATCT GCGCGCAGGT CGCAGGCAAA CAGCCAAACC GTCATGCACG
AACCGCGAGC CCATGCCAGG GCGCTCGCCC CGTGTGGCCC GACGCAGGCA CGAGACGCGC
TCCCGCCTGC TCGATGCCGC ATTCGGGCTG GTCGTGGAAA ATGGAATGGA CGGCGTCACG
ATCAGTCAGA TTACGGACGC AGCGGACGTG GGATTCGGGT CCTTCTATAG CCACTTCGAC
TCCAAGGAAG GCATCTTCGC TGCGCTGGTC GAGTGGCTCT TCGAGGAATT CGCTAACACG
CTTGACCGAC TCGCCAGCGG ATTGACCGAC CCGGCGGAAG TCATCGCAGT TTCTGTGCGC
CATACGCTTT TGCGCGCCTA CCGCGAACCG GTATGGGGAC AACTGCTGAT ACGCGAAGGA
TTGTCCGCGC GTGCGCTCAG CAGAGGACTG GGTCAGCGGC TGCTGCGAGA CACGGCACGA
GGCATTGCAG AGAAGCGCTT TCAGGTCGCA GATGAACTGA TGTCCGTGAT TTCGGTGATT
GGCACCGTGC TGGCGGCAAT CGCTGCGGAA CTCGATCTCT CGACGCCGCC CAGGCGGACC
TCGCGCATCC GCAAGATTCT CCCGTCGAGG GCCGAGAAAT TCGCCGGGAG TACCGCGGCC
ATCGTCTTGC AGGCGTTTGG TCTCGCACGA CCGGAAGCCG AGAAGATCGC CCGCCGTCCG
CTGCCGGCAG CGCTGCAGGA TACAACCGCC TGA
|
|---|
| Protein sequence | MPDGRHLRAG RRQTAKPSCT NREPMPGRSP RVARRRHETR SRLLDAAFGL VVENGMDGVT
ISQITDAADV GFGSFYSHFD SKEGIFAALV EWLFEEFANT LDRLASGLTD PAEVIAVSVR
HTLLRAYREP VWGQLLIREG LSARALSRGL GQRLLRDTAR GIAEKRFQVA DELMSVISVI
GTVLAAIAAE LDLSTPPRRT SRIRKILPSR AEKFAGSTAA IVLQAFGLAR PEAEKIARRP
LPAALQDTTA
|
|---|
| |