More than 300 homologs were found in PanDaTox collection
for query gene Cpin_3323 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3323  Glutaryl-CoA dehydrogenase  100 
 
 
454 aa  937    Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.0000794594 
 
 
-
 
NC_013037  Dfer_5685  acyl-CoA dehydrogenase domain protein  67.56 
 
 
452 aa  643    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1209  acyl-CoA dehydrogenase domain protein  71.87 
 
 
453 aa  695    Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.858304 
 
 
-
 
NC_014230  CA2559_01490  Acyl-CoA dehydrogenase  71.14 
 
 
453 aa  680    Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1396  Acyl-CoA dehydrogenase  63.01 
 
 
400 aa  538  9.999999999999999e-153  Burkholderia sp. 383  Bacteria  normal  0.012547  normal 
 
 
-
 
NC_008025  Dgeo_1221  acyl-CoA dehydrogenase-like protein  55.43 
 
 
466 aa  501  1e-141  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.395809  normal  0.664246 
 
 
-
 
NC_013595  Sros_6905  Glutaryl-CoA dehydrogenase  58.66 
 
 
382 aa  476  1e-133  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0098  acyl-CoA dehydrogenase domain protein  50.8 
 
 
442 aa  453  1.0000000000000001e-126  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0434945  normal  0.951053 
 
 
-
 
NC_009972  Haur_3470  acyl-CoA dehydrogenase domain-containing protein  53.91 
 
 
395 aa  433  1e-120  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.131363  n/a   
 
 
-
 
NC_011886  Achl_1382  acyl-CoA dehydrogenase domain protein  51.25 
 
 
396 aa  413  1e-114  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000229631 
 
 
-
 
NC_011831  Cagg_0077  acyl-CoA dehydrogenase domain protein  53.89 
 
 
394 aa  414  1e-114  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3043  acyl-CoA dehydrogenase domain protein  50.52 
 
 
402 aa  400  9.999999999999999e-111  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.942472  n/a   
 
 
-
 
NC_008541  Arth_1365  acyl-CoA dehydrogenase domain-containing protein  50.38 
 
 
396 aa  399  9.999999999999999e-111  Arthrobacter sp. FB24  Bacteria  normal  0.0100837  n/a   
 
 
-
 
NC_013235  Namu_0871  acyl-CoA dehydrogenase domain protein  47.5 
 
 
409 aa  397  1e-109  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3505  acyl-CoA dehydrogenase domain protein  49.23 
 
 
393 aa  389  1e-107  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.147907  normal 
 
 
-
 
NC_008148  Rxyl_2455  acyl-CoA dehydrogenase-like protein  51.04 
 
 
398 aa  388  1e-106  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.19606  n/a   
 
 
-
 
NC_013757  Gobs_1809  Glutaryl-CoA dehydrogenase  51.17 
 
 
395 aa  381  1e-104  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.141566  n/a   
 
 
-
 
NC_013757  Gobs_2382  Glutaryl-CoA dehydrogenase  48.7 
 
 
407 aa  370  1e-101  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2061  acyl-CoA dehydrogenase-like protein  52.07 
 
 
404 aa  363  3e-99  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3822  acyl-CoA dehydrogenase domain-containing protein  47.68 
 
 
408 aa  362  9e-99  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0375  acyl-CoA dehydrogenase-like protein  48.04 
 
 
385 aa  353  2.9999999999999997e-96  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0610  acyl-CoA dehydrogenase domain-containing protein  44.78 
 
 
410 aa  345  8e-94  Arthrobacter sp. FB24  Bacteria  normal  0.326898  n/a   
 
 
-
 
NC_011886  Achl_0739  acyl-CoA dehydrogenase domain protein  43.27 
 
 
411 aa  340  2.9999999999999998e-92  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_03070  acyl-CoA dehydrogenase  44.47 
 
 
404 aa  322  6e-87  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0638  acyl-CoA dehydrogenase domain protein  40.97 
 
 
396 aa  321  1.9999999999999998e-86  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_0031  acyl-CoA dehydrogenase domain protein  43.59 
 
 
399 aa  320  3e-86  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_02900  acyl-CoA dehydrogenase  43.08 
 
 
402 aa  317  2e-85  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2387  acyl-CoA dehydrogenase-like protein  44.62 
 
 
402 aa  317  3e-85  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.702715  n/a   
 
 
-
 
NC_008541  Arth_0434  acyl-CoA dehydrogenase domain-containing protein  40.82 
 
 
404 aa  315  9.999999999999999e-85  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30270  acyl-CoA dehydrogenase  44.59 
 
 
461 aa  315  1.9999999999999998e-84  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0502  acyl-CoA dehydrogenase domain protein  41.3 
 
 
387 aa  305  1.0000000000000001e-81  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_012803  Mlut_19560  acyl-CoA dehydrogenase  41.49 
 
 
400 aa  305  1.0000000000000001e-81  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2905  acyl-CoA dehydrogenase domain protein  40.52 
 
 
387 aa  304  2.0000000000000002e-81  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0987  acyl-CoA dehydrogenase domain protein  40.62 
 
 
395 aa  303  5.000000000000001e-81  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0223  acyl-CoA dehydrogenase domain protein  41.73 
 
 
414 aa  301  2e-80  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0223  acyl-CoA dehydrogenase domain-containing protein  42.15 
 
 
403 aa  298  2e-79  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0217  acyl-CoA dehydrogenase domain-containing protein  42.15 
 
 
403 aa  298  2e-79  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1746  acyl-CoA dehydrogenase-like protein  40.1 
 
 
401 aa  292  9e-78  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2075  Acyl-CoA dehydrogenase-like  40.26 
 
 
392 aa  289  6e-77  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000000000570553  normal 
 
 
-
 
NC_008148  Rxyl_1877  acyl-CoA dehydrogenase-like protein  39.84 
 
 
386 aa  288  1e-76  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012029  Hlac_2578  acyl-CoA dehydrogenase domain protein  38.44 
 
 
386 aa  287  2e-76  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_014212  Mesil_2522  acyl-CoA dehydrogenase domain protein  38.28 
 
 
386 aa  281  2e-74  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2761  acyl-CoA dehydrogenase-like  39.43 
 
 
430 aa  279  7e-74  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.192493  n/a   
 
 
-
 
NC_013510  Tcur_0541  acyl-CoA dehydrogenase domain protein  39.32 
 
 
384 aa  275  1.0000000000000001e-72  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0830  acyl-CoA dehydrogenase domain-containing protein  37.76 
 
 
397 aa  274  2.0000000000000002e-72  Meiothermus ruber DSM 1279  Bacteria  normal  0.897667  normal 
 
 
-
 
NC_008255  CHU_1408  acyl-CoA dehydrogenase  38.54 
 
 
392 aa  271  2e-71  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.458942  normal  0.702038 
 
 
-
 
NC_013501  Rmar_1436  acyl-CoA dehydrogenase domain protein  38.3 
 
 
415 aa  270  4e-71  Rhodothermus marinus DSM 4252  Bacteria  normal  0.549354  n/a   
 
 
-
 
NC_011071  Smal_0159  acyl-CoA dehydrogenase domain protein  36.72 
 
 
397 aa  269  7e-71  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3206  acyl-CoA dehydrogenase domain-containing protein  38.5 
 
 
392 aa  269  8e-71  Thermobispora bispora DSM 43833  Bacteria  normal  0.0674188  normal 
 
 
-
 
NC_011886  Achl_2757  acyl-CoA dehydrogenase domain protein  39.02 
 
 
396 aa  268  1e-70  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00133725 
 
 
-
 
NC_008009  Acid345_0610  acyl-CoA dehydrogenase-like  36.1 
 
 
392 aa  268  2e-70  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.777279  normal 
 
 
-
 
NC_013061  Phep_2329  acyl-CoA dehydrogenase domain protein  37.24 
 
 
396 aa  267  2.9999999999999995e-70  Pedobacter heparinus DSM 2366  Bacteria  normal  0.480554  normal  0.133919 
 
 
-
 
NC_013037  Dfer_2638  acyl-CoA dehydrogenase domain protein  37.24 
 
 
387 aa  267  2.9999999999999995e-70  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4233  acyl-CoA dehydrogenase domain-containing protein  38.6 
 
 
394 aa  266  8e-70  Sphingomonas wittichii RW1  Bacteria  normal  0.0274104  normal 
 
 
-
 
NC_014165  Tbis_3367  acyl-CoA dehydrogenase domain-containing protein  38.86 
 
 
385 aa  265  1e-69  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0874  acyl-CoA dehydrogenase domain protein  37.34 
 
 
419 aa  264  2e-69  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3055  acyl-CoA dehydrogenase domain-containing protein  37.12 
 
 
399 aa  264  2e-69  Arthrobacter sp. FB24  Bacteria  normal  0.712311  n/a   
 
 
-
 
NC_014165  Tbis_1745  acyl-CoA dehydrogenase domain-containing protein  38.44 
 
 
393 aa  264  3e-69  Thermobispora bispora DSM 43833  Bacteria  normal  0.0523297  normal 
 
 
-
 
NC_008726  Mvan_4671  acyl-CoA dehydrogenase domain-containing protein  39.68 
 
 
396 aa  264  3e-69  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.525963 
 
 
-
 
NC_014230  CA2559_04655  Acyl-CoA dehydrogenase-like protein  37.5 
 
 
392 aa  263  6.999999999999999e-69  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17470  acyl-CoA dehydrogenase  37.76 
 
 
396 aa  263  6.999999999999999e-69  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.773993  normal 
 
 
-
 
NC_008705  Mkms_4222  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
389 aa  262  1e-68  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0429  acyl-CoA dehydrogenase domain-containing protein  38.28 
 
 
386 aa  260  4e-68  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9061  acyl-CoA dehydrogenase domain protein  39.64 
 
 
385 aa  259  6e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4378  acyl-CoA dehydrogenase domain-containing protein  37.67 
 
 
376 aa  258  2e-67  Mycobacterium sp. JLS  Bacteria  decreased coverage  0.00748225  normal  0.667747 
 
 
-
 
NC_008146  Mmcs_4147  acyl-CoA dehydrogenase-like protein  37.67 
 
 
376 aa  258  2e-67  Mycobacterium sp. MCS  Bacteria  normal  0.0923518  n/a   
 
 
-
 
NC_014210  Ndas_0844  acyl-CoA dehydrogenase domain protein  38.54 
 
 
396 aa  256  4e-67  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.114761 
 
 
-
 
NC_009953  Sare_0517  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
386 aa  256  4e-67  Salinispora arenicola CNS-205  Bacteria  normal  0.602895  decreased coverage  0.000687036 
 
 
-
 
NC_013131  Caci_8460  acyl-CoA dehydrogenase domain protein  37.92 
 
 
391 aa  255  1.0000000000000001e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0246683 
 
 
-
 
NC_007333  Tfu_1068  glutaryl-CoA dehydrogenase  37.66 
 
 
396 aa  253  7e-66  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_23170  acyl-CoA dehydrogenase  36.25 
 
 
408 aa  251  2e-65  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1284  acyl-CoA dehydrogenase domain protein  35.96 
 
 
404 aa  251  2e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5749  glutaryl-CoA dehydrogenase  38.6 
 
 
387 aa  251  2e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.283278  normal  0.312995 
 
 
-
 
NC_009565  TBFG_10405  acyl-CoA dehydrogenase fadE7  36.22 
 
 
395 aa  251  2e-65  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4712  acyl-CoA dehydrogenase domain-containing protein  35.84 
 
 
397 aa  250  3e-65  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.145534 
 
 
-
 
NC_013730  Slin_1026  acyl-CoA dehydrogenase domain protein  36.69 
 
 
402 aa  250  4e-65  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1162  Acyl-CoA dehydrogenase-like  35.96 
 
 
404 aa  249  5e-65  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0873897  normal  0.0990997 
 
 
-
 
NC_010717  PXO_04805  acyl-CoA dehydrogenase 1  35.88 
 
 
391 aa  249  7e-65  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2231  acyl-CoA dehydrogenase domain protein  36.36 
 
 
392 aa  249  8e-65  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.782486 
 
 
-
 
NC_009441  Fjoh_1290  acyl-CoA dehydrogenase domain-containing protein  35.68 
 
 
393 aa  248  2e-64  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4513  acyl-CoA dehydrogenase domain-containing protein  35.14 
 
 
402 aa  247  3e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_2879  acyl-CoA dehydrogenase-like protein  36.52 
 
 
400 aa  247  4e-64  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0608  acyl-CoA dehydrogenase  35.06 
 
 
404 aa  246  4.9999999999999997e-64  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2005  glutaryl-CoA dehydrogenase  37.7 
 
 
395 aa  246  6e-64  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.518246  n/a   
 
 
-
 
NC_013441  Gbro_4408  acyl-CoA dehydrogenase domain protein  35.71 
 
 
394 aa  246  8e-64  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4292  acyl-CoA dehydrogenase domain-containing protein  36.03 
 
 
389 aa  246  9e-64  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1264  acyl-CoA dehydrogenase-like  35.43 
 
 
404 aa  245  9.999999999999999e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.51833  normal  0.675418 
 
 
-
 
NC_007964  Nham_0753  acyl-CoA dehydrogenase-like  35.06 
 
 
404 aa  245  9.999999999999999e-64  Nitrobacter hamburgensis X14  Bacteria  normal  0.202646  n/a   
 
 
-
 
NC_009485  BBta_2451  glutaryl-CoA dehydrogenase  35.32 
 
 
404 aa  244  1.9999999999999999e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3419  acyl-CoA dehydrogenase domain-containing protein  35.58 
 
 
394 aa  243  3e-63  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0350417  n/a   
 
 
-
 
NC_009484  Acry_0857  acyl-CoA dehydrogenase domain-containing protein  35.77 
 
 
408 aa  244  3e-63  Acidiphilium cryptum JF-5  Bacteria  hitchhiker  0.00258655  n/a   
 
 
-
 
NC_014158  Tpau_1329  acyl-CoA dehydrogenase domain protein  36.01 
 
 
389 aa  244  3e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.066051  n/a   
 
 
-
 
NC_009511  Swit_0822  acyl-CoA dehydrogenase domain-containing protein  35.84 
 
 
394 aa  243  3.9999999999999997e-63  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0419  acyl-CoA dehydrogenase domain protein  36.97 
 
 
395 aa  242  7.999999999999999e-63  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3069  acyl-CoA dehydrogenase-like  35.06 
 
 
404 aa  241  2e-62  Jannaschia sp. CCS1  Bacteria  normal  0.66075  normal  0.0926601 
 
 
-
 
NC_007925  RPC_4297  acyl-CoA dehydrogenase-like  34.84 
 
 
404 aa  241  2e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.296437  normal  0.0883749 
 
 
-
 
NC_008726  Mvan_1857  acyl-CoA dehydrogenase domain-containing protein  34.37 
 
 
401 aa  241  2e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0539  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.53 
 
 
391 aa  240  4e-62  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011671  PHATR_25572  predicted protein  35.15 
 
 
470 aa  240  4e-62  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007948  Bpro_1671  acyl-CoA dehydrogenase-like  36.65 
 
 
398 aa  239  5.999999999999999e-62  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
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