Gene Namu_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0031 
Symbol 
ID8445610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp37024 
End bp38223 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content71% 
IMG OID645039182 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003199458 
Protein GI258650302 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC CGACGGCGCC CGACCACGAC AGCCCCCCGA CCGCCCTGGA CACCGACTAC 
TACGCGGTCT TCGCCGACGT TCCCGAGGCG GATCGGCTGT TCTGGAAGCG GGCCCGGACC
TTCGCCGAGG ACACCCTGGC CGAGGTCAAC CAGGCGTGGG ACCAGGGCGA GTACCCGCTT
CACCTGGCCC GCCGGCTGGG CGAGCTGGAC CTGCTCACCG ACGGGGTGGT CGGACCCGGC
CTGACGCCGA TGTCGCCGCT GGCCGCCGGC CTGGTCAACA TGGAGATCTC CCGCGGAGAC
GGGTCGATGG GCACCGTCAT TGCCGTCCAG GGCGGTCTGG CCCTGCGCTC CATCGCGTTG
TTCGGTAGCG CCGAGCAGCA GGCGCGGTGG CTGGTCCCGC TGGCCCGCGG GGAGAAGTTG
GGCGCGTTCG CCCTCACCGA ACCGACTCAC GGTTCGGACT CGGTGGCGTT GGAGACGACC
GCGGTCCGTG ACGGTGACGG CTGGGTGATC AACGGGTGCA AGCGCTGGAT CGGCAATGGT
TCGGTCGGTG ACGTCACCGT GGTCTGGGCC CGCGACGAGC AGGGTCACGT CCGCGGCTTC
CTGGTCGAGC AGGACACCCC CGGGTACCGG GGCGAGACGA TCCGGGGCAA GGCCTCGCTG
CGGGCCATCC ATCAGGCCCA CATCACGCTG ACCGACGTGC GGGTGCCGCT GGACGCGGTG
CTGCCCGGCA CGCACAGCTT CAAGGACGCC TCCCGGGTGC TGCTGGCCAC CCGCCTGGGA
GTCGCCTGGG CCGCGCTGGG GCACGCCACC GCGGTGTTCG AGGCGGCGCT GACCTACTCC
CGGACCCGCA TCCAGTTCGG CAAACCGCTG GCCTCGTTCC AGCTGGTGCA GGAACGGCTG
ACCCGGATGC TGGCCACCCT GACCACCATG CAGTTGACCT GCCGGCACCT GGCCGCCCTG
GACCAGGCCG GCACCCTCAC CCCCACCCAG GCCGCGCTGG CCAAGTACAC CAACACCCGC
GGCGCCCGCG AGCTGGCCGC GATCGCCCGG GACATGCTCG GCGGCAACGG GATCCTGCTG
GAGAACCACG TCATCCGGCA CATGGCCGAC GTCGAGTCCC TGCACACCTA CGAGGGCACC
GAGAGCATCC AGGCCCTGCT CATCGGTCGC GACCTGACCG GCATCAGCGC CTTCGCCTGA
 
Protein sequence
MTMPTAPDHD SPPTALDTDY YAVFADVPEA DRLFWKRART FAEDTLAEVN QAWDQGEYPL 
HLARRLGELD LLTDGVVGPG LTPMSPLAAG LVNMEISRGD GSMGTVIAVQ GGLALRSIAL
FGSAEQQARW LVPLARGEKL GAFALTEPTH GSDSVALETT AVRDGDGWVI NGCKRWIGNG
SVGDVTVVWA RDEQGHVRGF LVEQDTPGYR GETIRGKASL RAIHQAHITL TDVRVPLDAV
LPGTHSFKDA SRVLLATRLG VAWAALGHAT AVFEAALTYS RTRIQFGKPL ASFQLVQERL
TRMLATLTTM QLTCRHLAAL DQAGTLTPTQ AALAKYTNTR GARELAAIAR DMLGGNGILL
ENHVIRHMAD VESLHTYEGT ESIQALLIGR DLTGISAFA