| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5685 |
|---|
| Symbol | |
|---|
| ID | 8229301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6832261 |
|---|
| End bp | 6833619 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644933531 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003090039 |
|---|
| Protein GI | 255039418 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT TCAAATCCTT TTCCCAGTTA CGCAACCTCC TCAAATCCAT CGACATCGAA
GCAGTCAGCA AGTTGTCCCA AAAGGTAGAC CTCAACCAGC TCATGGGCGT CGTGTCCAAA
ATGAGTGAGG AAGACCTCGG TAAAATGCTG AAATTCATGC AAGCCGGTTC GGGCAAAAAG
AAAGCCCCGC CGGTGGTGAA CGGCGATTTT TACGAACTGG CTTCCACACT GAGTCCCGAG
GAACGGGAAA TCCAGCTCAA AGTGCGGGAT TTTATGGAAA CGGAAATCCG CCCGATCGCC
AACTATTACT GGAACAATGC CCAGTTTCCA ATGCATATCA TCGCGCTGAT GGCCAGGCTG
AACATCTGCG GGCTCACTTA CCAGGGATAT GGCTGCGCAG GCCGTTCCGC ATTGCTCGAA
GGCTTCATCG CCATGGAAAT GGCCCGTGTC GATTCGTCCA TTTCGACGTT TTTCGGTGTG
CACAGCGGCC TGGCGATGGG CTCCATTTAC CTTTGCGGCT CGGAGGAACA AAAGCAGCAA
TGGCTGCCGG TGATGCAGCG CATGGAGCTG ATCGGCGCAT TCGGGCTTAC GGAGCCGGAG
GTAGGCTCAG GCGCCGCGGG CGGGCTTACC ACCACCTGCA AAAAGGAGGG CGACGAATGG
GTGATCAACG GCCAGAAGAA ATGGATCGGC AACGCCACAT TCTCCGACAT TACGATTATC
TGGGCACGCG ATCTGGGCGA TAACCAGGTC AAAGGGTTTA TCGTCAAAAA GGAAAACCCC
GGATTTAAAG CCGAAAAAAT GGAGGATAAA ATGGCGCTTC GCACGGTGCA AAATGCATTA
ATCACGCTCA CCGACTGCCG CGTGCCTGAA ACCGACCGTC TTCAAAATGC CAATTCGTTT
AAGGATACTG CCAATGTGCT GCGCATGACG CGTGCCGGGG TGGCGTGGCA GGCAGTAGGT
TGCGGCCGCG GTGCCTACGA GCTGGCATTG AAGTACACCA TGCAACGGAA GCAGTTCGGC
CGCCCGATCG CTGGCTTCCA GCTCGTTCAG GACCTGCTCG TCACCATGTT GGGCGACCTT
ACGGCCATGC AAACGATGGT TTACCGGCTT TCGCAATTGC AGGATGCCGG CGACCTGGCC
GATGAGCACG CCTCACTCGC CAAGGTATTC TGTACGCTTC GGATGCGGTC CATCGTGGAT
CACGCCCGCG AGCTCTTCGG CGGGAATGGC ATTTTGCTCG AATACGACAT TGCGCGCTTC
GTGGCGGATG CCGAGGCCAT TTATTCTTAC GAGGGTACCA AGGAAATCAA TTCGCTGATC
GTCGGGCGGG CGATCACCGG CGAGAGTGCG TTTGTATAG
|
|---|
| Protein sequence | MNLFKSFSQL RNLLKSIDIE AVSKLSQKVD LNQLMGVVSK MSEEDLGKML KFMQAGSGKK
KAPPVVNGDF YELASTLSPE EREIQLKVRD FMETEIRPIA NYYWNNAQFP MHIIALMARL
NICGLTYQGY GCAGRSALLE GFIAMEMARV DSSISTFFGV HSGLAMGSIY LCGSEEQKQQ
WLPVMQRMEL IGAFGLTEPE VGSGAAGGLT TTCKKEGDEW VINGQKKWIG NATFSDITII
WARDLGDNQV KGFIVKKENP GFKAEKMEDK MALRTVQNAL ITLTDCRVPE TDRLQNANSF
KDTANVLRMT RAGVAWQAVG CGRGAYELAL KYTMQRKQFG RPIAGFQLVQ DLLVTMLGDL
TAMQTMVYRL SQLQDAGDLA DEHASLAKVF CTLRMRSIVD HARELFGGNG ILLEYDIARF
VADAEAIYSY EGTKEINSLI VGRAITGESA FV
|
|---|
| |