| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4712 |
|---|
| Symbol | |
|---|
| ID | 5423042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5225347 |
|---|
| End bp | 5226540 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640883976 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001419588 |
|---|
| Protein GI | 154248630 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.145534 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCG CCACCAAGCC CGTGTTCGAC TGGACCGACC CCTTCGACCT CAACGGCCAG
CTCACCGAGG ACGAGCGGCT GGTGCGCGAC ACCGCGCGCG ACTATGCGCA GGAGAAGCTG
CTGCCCCGCG TCACCTCTGC CTATCTGGAG GAGCGGTTCG ACCGCGAAAT CATGAACGAG
ATGGGCGAAT TGGGCCTGCT CGGCCCCACC ATCCCGGCGG AATACGGCGG CGCGGGCCTC
GGCTATGTGT CCTACGGCCT TGCCGCGCGC GAGGTGGAGC GGGTGGATAG CGGCTACCGC
TCGGCCATGA GCGTGCAGTC CTCCCTCGTC ATGCACCCCA TCTACGCCTA TGGCACCGAG
GCCCAGCGCC AGAAGTATCT GCCGAAGCTC GCCACCGGCG AGTGGATCGG CTGCTTCGGC
CTCACCGAGC CGGATGCGGG TTCCGATCCC GCCGGCATGC GCACCCGCGC CGAGAAGATC
GACGGCGGCT ATCGCCTGAA CGGCGCCAAG ATGTGGATCA CCAATTCACC CATCGCCGAC
CTCGCGGTGG TGTGGGCGAA GTCGGCGGCC CACGACAATG CCATCCGCGG CTTCGTGGTG
GAGCGCGGCA TGAAGGGCTT CTCCACCCCC AAGATCGAGG GCAAGCTCTC GCTGCGCGCC
TCCATCACCG GCGAGATCGT GCTGGAGGAC GTGGAGATCC CCGAAGAGAA CCTGCTGCCC
AACGTGTCCG GCCTTGCCGG CCCGTTCGGC TGCCTCAACC GGGCGCGCTA CGGCATCGGC
TGGGGCGCCA TGGGCGCGGC GGAGGCCTGC TTCGCCCAGG CCCGCCAATA CACGCTGGAC
CGCAAGCAGT TCGGCAAGCC GCTGGCCGCC ACCCAATTGG TGCAGAAGAA GCTGGCGGAC
ATGGCCACCG ACATCGCCTT CGGCCTGCAG GCCTGCCTGC GCGTCGGCCG GCTGTTCGAG
GAAGGCCGCC TGCCGCCGGA GACCATCTCC TTCATCAAGC GCAACAATTG CGGCAAGGCG
CTGGACATTG CCCGCACCGC CCGCGACATG CACGGCGGCA ACGGCATCTC CGCCGAATTC
CACGTCATCC GCCACGCCGC GAACCTTGAG ACCGTGAACA CCTATGAGGG CACGCACGAC
ATCCATGCGC TGATCCTCGG CCGCGGCATC ACCGGCATCC AGGCGTTCTT CTGA
|
|---|
| Protein sequence | MAAATKPVFD WTDPFDLNGQ LTEDERLVRD TARDYAQEKL LPRVTSAYLE ERFDREIMNE
MGELGLLGPT IPAEYGGAGL GYVSYGLAAR EVERVDSGYR SAMSVQSSLV MHPIYAYGTE
AQRQKYLPKL ATGEWIGCFG LTEPDAGSDP AGMRTRAEKI DGGYRLNGAK MWITNSPIAD
LAVVWAKSAA HDNAIRGFVV ERGMKGFSTP KIEGKLSLRA SITGEIVLED VEIPEENLLP
NVSGLAGPFG CLNRARYGIG WGAMGAAEAC FAQARQYTLD RKQFGKPLAA TQLVQKKLAD
MATDIAFGLQ ACLRVGRLFE EGRLPPETIS FIKRNNCGKA LDIARTARDM HGGNGISAEF
HVIRHAANLE TVNTYEGTHD IHALILGRGI TGIQAFF
|
|---|
| |