| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3323 |
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| Symbol | |
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| ID | 8359489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4087398 |
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| End bp | 4088762 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965496 |
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| Product | Glutaryl-CoA dehydrogenase |
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| Protein accession | YP_003122991 |
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| Protein GI | 256422338 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000794594 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGTTA AATTGTCCAC CATCAGGCAG GCCTTCCATT TATTGAAGAA CATTGACTTC
GAACAATTGG GGCGTTTATC CGAGAAGATA GATCTGCCGA AAGTAATGGC CACTGTAGGT
AAAATGAATG ACCAGCAACT TTCTGGTCTG ATGCGTATGC TGCAGAGCAG CGGCGGAGAA
AGAAAAAAAG AGTTACCACC CGTAAATGGT GATTTTTATG ACCTGAGCGG AATGCTGAGT
CCGGAGGACA GGGCGTTGCA GCTGAAGGTC CGCGAATTTA TGGAATCTGA GGTGCAACCT
ATTGTCAATG AACACTGGGT GAAATCTGAT TTTCCTTTTC AGTTACTGCC GAAGCTGGCA
GCCCTGGATA TCTGCGGCTC GACTTACGAA GGGTATGGCG GTATTCAATC CTCTTTTCTG
ATGGAAGGTA TTATCACAAT GGAAATTGCA CGGGTGGATT GTTCCATGGC GACTTTCTTC
GGGGTGCAGA GTGGTCTGGC GATGGGTTCT ATCTATCTGC TGGGATCGGA GGAACAGAAG
AAGGAGTGGT TGCCGGGTAT GCAGCGGCTG GAAAAGATCG GTGCTTTTGG GCTGACAGAG
CCGGAAGTAG GTTCCGGTGC GGCTGGCGGA CTTACTACTA CGGCCAAACG GGACGGGGAT
ACCTGGATAC TGAATGGTCA GAAGAAGTGG ATCGGGAATG CCACCTTTGC GGATGTGTTG
GTGATCTGGG CAAGAGATGT GGATGATAAT GAGGTAAAAG GATTTCTGGT GAAGAAGGAT
ACCCCGGGTT TCAGTGTAGA GAAGATGCAC GATAAAATGG CGTTGCGTAT AGTACAGAAC
GGAGTGATTA CGTTGAAGGA TTGTGTGGTG GAAGAGAAAG ATCGTTTACA ACACGCCAAT
TCCTTTAAAG ATACAGCGAA GGTATTACGG ATGACCCGTG CAGGCGTCGC CTGGCTGGCA
GTAGGATGTG CCAGGGGGGC GTATGAGAAT GCGCTGGCTT ATACGCAGAA GCGGAAGCAG
TTTGGTCGCC CGATCGGTTC ATTCCAGCTG ATCCAGAATC ACCTGGTGGA GATGCTGTCG
AATCTGACGG CTATGCAGAC GATGGTCTAC CGTTTATCGG AGTTACAGGA TGAGGGTAGG
CTGGAAGATG AACATGCCTC TATTGCGAAA GTATTCTGTT CATTGCGTAC GCGTGATATT
GTGAGTCGTG CGAGGGAGGT AATGGGCGGT AATGGTATAC TGCTGGAATA TAATGTGGCG
CGTTTTGTAG CGGATGCAGA AGCGATCTAT TCTTATGAGG GTACGAAGGA GATCAACTCG
CTGATTGTGG GAAGGGCGAT CACCGGGTTC AGTGCATTTG TATAA
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| Protein sequence | MAVKLSTIRQ AFHLLKNIDF EQLGRLSEKI DLPKVMATVG KMNDQQLSGL MRMLQSSGGE
RKKELPPVNG DFYDLSGMLS PEDRALQLKV REFMESEVQP IVNEHWVKSD FPFQLLPKLA
ALDICGSTYE GYGGIQSSFL MEGIITMEIA RVDCSMATFF GVQSGLAMGS IYLLGSEEQK
KEWLPGMQRL EKIGAFGLTE PEVGSGAAGG LTTTAKRDGD TWILNGQKKW IGNATFADVL
VIWARDVDDN EVKGFLVKKD TPGFSVEKMH DKMALRIVQN GVITLKDCVV EEKDRLQHAN
SFKDTAKVLR MTRAGVAWLA VGCARGAYEN ALAYTQKRKQ FGRPIGSFQL IQNHLVEMLS
NLTAMQTMVY RLSELQDEGR LEDEHASIAK VFCSLRTRDI VSRAREVMGG NGILLEYNVA
RFVADAEAIY SYEGTKEINS LIVGRAITGF SAFV
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