| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2005 |
|---|
| Symbol | |
|---|
| ID | 3835430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2316143 |
|---|
| End bp | 2317330 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637826105 |
|---|
| Product | glutaryl-CoA dehydrogenase |
|---|
| Protein accession | YP_427092 |
|---|
| Protein GI | 83593340 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.518246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAT CTCCGCTTGC CAATTGGGAT GACCTGCTCG ACCTGGACGG CGCTTTGGCC
GAAGACGAGC GGATGATCCG CGACAGCGCC CGGGCCTATT GCCAGGACAA GCTGATGCCC
CGGGTGGTCG AGGCCAACCG TCACGAACAT TTCGACCGGG CGATCATGAC CGAGATGGGG
GCGCTTGGCC TGCTTGGTCC GACCATCCCC GAGGAATACG GCGGCCCCGG CGTCAACCAT
GTCGCCTATG GGCTAATCGC GCGGGAGGTC GAGCGCGTCG ACAGCGGCTA TCGTTCGGCG
ATGAGCGTGC AGTCCTCGCT GGTCATGCAT CCGATCTACG CCTATGGCAG CGACGCGCAG
AAGGCCACTT GGCTGCCGGC CTTGGCCAGC GGCGAGAAGA TCGGCTGTTT CGGCCTGACC
GAGCCCGACC ATGGCTCCGA TCCCGGTTCG ATGAAGACGC GGGCGACCAA AACCGCCGGC
GGCTATCGGC TGAACGGCGC CAAGATGTGG ATCACCAACA GCCCGATCGC CGATCTCGCC
GTGGTCTGGG CCAAATCCGA GGCCCATGAC GACAAGATCC GCGGCTTCCT GGTCGAACGC
GGCATGAAGG GCTTTTCCAC CCCGAAGATC GAGGGCAAGT TCTCGCTGCG CGCCTCGCTC
ACCGGCGAAA TCGTCCTCGA TGATTGCGTC GTGCCCGAAG CCAACCTGCT GCCTTTGGCC
GAAGGATTGG CCGGGCCCTT TGGTTGCCTG AACAAGGCGC GCTATGGCAT CTCGTGGGGG
GCGATGGGCG CGGCCGAGTT CTGCTGGCAC GCCGCCCGCC AGTATACCCT CGACCGCCTG
CAGTTCGGCC GGCCGCTGGC CGCCACCCAG CTTATCCAGA AGAAACTGGC CGACATGCAG
ACCGAGATCA CGCTCGGCCT TTTGGGCTCG CTGCGCGTCG GCCGGCTGCT TGACGAGGGC
AAAGCGCGGC CCGAGGCGAT TTCCCTGGTC AAGCGCAACA ACGCCGGCAA GGCGCTTGAT
ATCGCCCGCG TCGCCCGCGA CATGCACGGC GGCAACGGCA TCGCCGATGA ATTCCACGTC
ATCCGCCATG TGATGAACCT GGAAAGCGTC AATACCTACG AGGGCACCCA CGATGTCCAC
GCCCTGATCC TCGGCCGCGC CCAAACCGGG TTGCAGGCCT TCTTCTAA
|
|---|
| Protein sequence | MTRSPLANWD DLLDLDGALA EDERMIRDSA RAYCQDKLMP RVVEANRHEH FDRAIMTEMG
ALGLLGPTIP EEYGGPGVNH VAYGLIAREV ERVDSGYRSA MSVQSSLVMH PIYAYGSDAQ
KATWLPALAS GEKIGCFGLT EPDHGSDPGS MKTRATKTAG GYRLNGAKMW ITNSPIADLA
VVWAKSEAHD DKIRGFLVER GMKGFSTPKI EGKFSLRASL TGEIVLDDCV VPEANLLPLA
EGLAGPFGCL NKARYGISWG AMGAAEFCWH AARQYTLDRL QFGRPLAATQ LIQKKLADMQ
TEITLGLLGS LRVGRLLDEG KARPEAISLV KRNNAGKALD IARVARDMHG GNGIADEFHV
IRHVMNLESV NTYEGTHDVH ALILGRAQTG LQAFF
|
|---|
| |