More than 300 homologs were found in PanDaTox collection
for query gene Bind_3247 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009505  BOV_2039  phenylalanyl-tRNA synthetase subunit beta  54.64 
 
 
804 aa  841    Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0361  phenylalanyl-tRNA synthetase subunit beta  47.67 
 
 
827 aa  649    Acidiphilium cryptum JF-5  Bacteria  normal  0.996315  n/a   
 
 
-
 
NC_009720  Xaut_1930  phenylalanyl-tRNA synthetase, beta subunit  58.71 
 
 
804 aa  896    Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0326717 
 
 
-
 
NC_011666  Msil_1838  phenylalanyl-tRNA synthetase, beta subunit  65.39 
 
 
810 aa  1031    Methylocella silvestris BL2  Bacteria  n/a    normal  0.0684561 
 
 
-
 
NC_010725  Mpop_1604  phenylalanyl-tRNA synthetase, beta subunit  64.81 
 
 
807 aa  1020    Methylobacterium populi BJ001  Bacteria  normal  0.140835  normal  0.0323303 
 
 
-
 
NC_004310  BR2123  phenylalanyl-tRNA synthetase subunit beta  54.64 
 
 
804 aa  841    Brucella suis 1330  Bacteria  normal  0.615312  n/a   
 
 
-
 
NC_011004  Rpal_0036  phenylalanyl-tRNA synthetase subunit beta  61.04 
 
 
803 aa  924    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.393053  n/a   
 
 
-
 
NC_011369  Rleg2_4271  phenylalanyl-tRNA synthetase subunit beta  55.09 
 
 
810 aa  875    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5551  phenylalanyl-tRNA synthetase, beta subunit  65.8 
 
 
808 aa  1028    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.325824  n/a   
 
 
-
 
NC_007406  Nwi_0065  phenylalanyl-tRNA synthetase subunit beta  59.02 
 
 
812 aa  905    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.145265 
 
 
-
 
NC_009428  Rsph17025_2491  phenylalanyl-tRNA synthetase subunit beta  51.22 
 
 
805 aa  786    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4536  phenylalanyl-tRNA synthetase subunit beta  55.41 
 
 
807 aa  875    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.140615 
 
 
-
 
NC_011989  Avi_0209  phenylalanyl-tRNA synthetase subunit beta  55.53 
 
 
807 aa  899    Agrobacterium vitis S4  Bacteria  normal  0.212777  n/a   
 
 
-
 
NC_007493  RSP_1761  phenylalanyl-tRNA synthetase subunit beta  51.96 
 
 
805 aa  795    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0797  phenylalanyl-tRNA synthetase subunit beta  55.01 
 
 
804 aa  848    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0407  phenylalanyl-tRNA synthetase subunit beta  51.83 
 
 
805 aa  793    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.70562  normal 
 
 
-
 
NC_011365  Gdia_3094  phenylalanyl-tRNA synthetase subunit beta  47.24 
 
 
820 aa  693    Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.067961 
 
 
-
 
NC_010172  Mext_1630  phenylalanyl-tRNA synthetase, beta subunit  64.69 
 
 
807 aa  1018    Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0126985 
 
 
-
 
NC_007643  Rru_A3524  phenylalanyl-tRNA synthetase subunit beta  49.19 
 
 
800 aa  727    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5318  phenylalanyl-tRNA synthetase, beta subunit  66.17 
 
 
808 aa  1023    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0273897 
 
 
-
 
NC_007778  RPB_0047  phenylalanyl-tRNA synthetase subunit beta  61.23 
 
 
802 aa  925    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0689  phenylalanyl-tRNA synthetase subunit beta  48.08 
 
 
796 aa  675    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.428867  n/a   
 
 
-
 
NC_009485  BBta_0212  phenylalanyl-tRNA synthetase subunit beta  61.36 
 
 
802 aa  935    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0454  phenylalanyl-tRNA synthetase subunit beta  50.74 
 
 
800 aa  763    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0444  phenylalanyl-tRNA synthetase subunit beta  59.56 
 
 
803 aa  897    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.341552  normal 
 
 
-
 
NC_010338  Caul_1188  phenylalanyl-tRNA synthetase subunit beta  51.15 
 
 
812 aa  749    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0162  phenylalanyl-tRNA synthetase subunit beta  61.82 
 
 
824 aa  926    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.676244  normal 
 
 
-
 
NC_009952  Dshi_0237  phenylalanyl-tRNA synthetase subunit beta  50.99 
 
 
798 aa  777    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0073  phenylalanyl-tRNA synthetase subunit beta  59.22 
 
 
817 aa  902    Nitrobacter hamburgensis X14  Bacteria  normal  0.252873  n/a   
 
 
-
 
NC_009636  Smed_3487  phenylalanyl-tRNA synthetase subunit beta  55.53 
 
 
808 aa  878    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1912  phenylalanyl-tRNA synthetase, beta subunit  60.84 
 
 
850 aa  992    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.24608 
 
 
-
 
NC_008043  TM1040_3623  phenylalanyl-tRNA synthetase subunit beta  49.88 
 
 
798 aa  763    Ruegeria sp. TM1040  Bacteria  normal  normal  0.117267 
 
 
-
 
NC_008254  Meso_0677  phenylalanyl-tRNA synthetase subunit beta  57.16 
 
 
801 aa  912    Chelativorans sp. BNC1  Bacteria  normal  0.443307  n/a   
 
 
-
 
NC_009511  Swit_2428  phenylalanyl-tRNA synthetase subunit beta  49.5 
 
 
792 aa  702    Sphingomonas wittichii RW1  Bacteria  normal  normal  0.153279 
 
 
-
 
NC_008347  Mmar10_0132  phenylalanyl-tRNA synthetase subunit beta  49.26 
 
 
799 aa  702    Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0221  phenylalanyl-tRNA synthetase, beta subunit  54.91 
 
 
812 aa  805    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3247  phenylalanyl-tRNA synthetase, beta subunit  100 
 
 
806 aa  1605    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3155  phenylalanyl-tRNA synthetase, beta subunit  63.35 
 
 
806 aa  1002    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2262  phenylalanyl-tRNA synthetase subunit beta  51.42 
 
 
795 aa  746    Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.283733 
 
 
-
 
NC_008783  BARBAKC583_1312  phenylalanyl-tRNA synthetase subunit beta  52.1 
 
 
803 aa  818    Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2783  phenylalanyl-tRNA synthetase subunit beta  46.85 
 
 
798 aa  603  1.0000000000000001e-171  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_002978  WD0425  phenylalanyl-tRNA synthetase subunit beta  39.78 
 
 
779 aa  579  1e-164  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0587  phenylalanyl-tRNA synthetase subunit beta  35.83 
 
 
785 aa  508  9.999999999999999e-143  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0434  phenylalanyl-tRNA synthetase subunit beta  35.59 
 
 
788 aa  499  1e-140  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1717  phenylalanyl-tRNA synthetase subunit beta  35.99 
 
 
795 aa  492  9.999999999999999e-139  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00142202  n/a   
 
 
-
 
NC_010465  YPK_1825  phenylalanyl-tRNA synthetase subunit beta  35.99 
 
 
795 aa  493  9.999999999999999e-139  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.713489  n/a   
 
 
-
 
NC_010159  YpAngola_A2620  phenylalanyl-tRNA synthetase subunit beta  35.99 
 
 
795 aa  491  1e-137  Yersinia pestis Angola  Bacteria  hitchhiker  0.00723547  normal 
 
 
-
 
NC_006368  lpp2765  phenylalanyl-tRNA synthetase subunit beta  35.5 
 
 
793 aa  484  1e-135  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2638  phenylalanyl-tRNA synthetase subunit beta  34.97 
 
 
793 aa  483  1e-135  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1455  phenylalanyl-tRNA synthetase, beta subunit  37.42 
 
 
789 aa  483  1e-135  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.105434  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1473  phenylalanyl-tRNA synthetase subunit beta  36.78 
 
 
792 aa  479  1e-134  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.000187632  n/a   
 
 
-
 
NC_012560  Avin_20470  phenylalanyl-tRNA synthetase subunit beta  36.91 
 
 
792 aa  480  1e-134  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1410  phenylalanyl-tRNA synthetase subunit beta  36.78 
 
 
792 aa  479  1e-134  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.0168176  n/a   
 
 
-
 
NC_008700  Sama_1952  phenylalanyl-tRNA synthetase subunit beta  35.44 
 
 
795 aa  478  1e-133  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1998  phenylalanyl-tRNA synthetase beta subunit  36.99 
 
 
784 aa  476  1e-133  Methylobacillus flagellatus KT  Bacteria  normal  0.109142  normal 
 
 
-
 
NC_008340  Mlg_0763  phenylalanyl-tRNA synthetase subunit beta  35.63 
 
 
797 aa  476  1e-133  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2149  phenylalanyl-tRNA synthetase subunit beta  35.5 
 
 
795 aa  479  1e-133  Serratia proteamaculans 568  Bacteria  normal  0.625217  normal 
 
 
-
 
NC_011083  SeHA_C1466  phenylalanyl-tRNA synthetase subunit beta  36.35 
 
 
795 aa  473  1e-132  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1893  phenylalanyl-tRNA synthetase subunit beta  36.11 
 
 
795 aa  473  1e-132  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2007  phenylalanyl-tRNA synthetase subunit beta  36.23 
 
 
795 aa  473  1e-132  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.693647 
 
 
-
 
NC_011149  SeAg_B1835  phenylalanyl-tRNA synthetase subunit beta  36.35 
 
 
795 aa  473  1e-132  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000347523  n/a   
 
 
-
 
NC_009997  Sbal195_1908  phenylalanyl-tRNA synthetase subunit beta  35.32 
 
 
795 aa  471  1.0000000000000001e-131  Shewanella baltica OS195  Bacteria  hitchhiker  0.00255913  normal 
 
 
-
 
NC_011094  SeSA_A1433  phenylalanyl-tRNA synthetase subunit beta  36.23 
 
 
795 aa  472  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.030197 
 
 
-
 
NC_008740  Maqu_2056  phenylalanyl-tRNA synthetase subunit beta  34.14 
 
 
790 aa  471  1.0000000000000001e-131  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0492  phenylalanyl-tRNA synthetase subunit beta  35.33 
 
 
792 aa  469  1.0000000000000001e-131  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.229173  n/a   
 
 
-
 
NC_011080  SNSL254_A1449  phenylalanyl-tRNA synthetase subunit beta  36.23 
 
 
795 aa  471  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2800  phenylalanyl-tRNA synthetase subunit beta  37.12 
 
 
802 aa  471  1.0000000000000001e-131  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1709  phenylalanyl-tRNA synthetase subunit beta  34.77 
 
 
795 aa  472  1.0000000000000001e-131  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.739174  n/a   
 
 
-
 
NC_009052  Sbal_1874  phenylalanyl-tRNA synthetase subunit beta  35.19 
 
 
795 aa  470  1.0000000000000001e-131  Shewanella baltica OS155  Bacteria  decreased coverage  0.000755096  n/a   
 
 
-
 
NC_008576  Mmc1_0368  phenylalanyl-tRNA synthetase beta subunit  35.16 
 
 
796 aa  471  1.0000000000000001e-131  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01682  phenylalanyl-tRNA synthetase beta subunit  36.13 
 
 
795 aa  467  9.999999999999999e-131  Escherichia coli BL21(DE3)  Bacteria  normal  0.0961927  n/a   
 
 
-
 
CP001637  EcDH1_1929  phenylalanyl-tRNA synthetase, beta subunit  36.13 
 
 
795 aa  467  9.999999999999999e-131  Escherichia coli DH1  Bacteria  hitchhiker  0.0000518334  n/a   
 
 
-
 
NC_012880  Dd703_2048  phenylalanyl-tRNA synthetase subunit beta  36.24 
 
 
795 aa  466  9.999999999999999e-131  Dickeya dadantii Ech703  Bacteria  normal  0.424555  n/a   
 
 
-
 
NC_009665  Shew185_1901  phenylalanyl-tRNA synthetase subunit beta  35.44 
 
 
795 aa  468  9.999999999999999e-131  Shewanella baltica OS185  Bacteria  hitchhiker  0.00294003  n/a   
 
 
-
 
NC_013421  Pecwa_2185  phenylalanyl-tRNA synthetase subunit beta  35.94 
 
 
795 aa  468  9.999999999999999e-131  Pectobacterium wasabiae WPP163  Bacteria  normal  0.861692  n/a   
 
 
-
 
NC_011663  Sbal223_2418  phenylalanyl-tRNA synthetase subunit beta  35.44 
 
 
795 aa  468  9.999999999999999e-131  Shewanella baltica OS223  Bacteria  decreased coverage  0.000318266  hitchhiker  0.0000890505 
 
 
-
 
NC_010468  EcolC_1918  phenylalanyl-tRNA synthetase subunit beta  36.13 
 
 
795 aa  467  9.999999999999999e-131  Escherichia coli ATCC 8739  Bacteria  normal  0.333448  normal  0.421493 
 
 
-
 
NC_009801  EcE24377A_1932  phenylalanyl-tRNA synthetase subunit beta  36.13 
 
 
795 aa  467  9.999999999999999e-131  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000000047761  n/a   
 
 
-
 
NC_010717  PXO_01388  phenylalanyl-tRNA synthetase subunit beta  38.24 
 
 
792 aa  466  9.999999999999999e-131  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.547763  n/a   
 
 
-
 
NC_009800  EcHS_A1793  phenylalanyl-tRNA synthetase subunit beta  36.13 
 
 
795 aa  467  9.999999999999999e-131  Escherichia coli HS  Bacteria  hitchhiker  0.000955232  n/a   
 
 
-
 
NC_009092  Shew_2215  phenylalanyl-tRNA synthetase subunit beta  35.16 
 
 
795 aa  469  9.999999999999999e-131  Shewanella loihica PV-4  Bacteria  normal  normal  0.188862 
 
 
-
 
NC_013889  TK90_0917  phenylalanyl-tRNA synthetase, beta subunit  36.73 
 
 
786 aa  469  9.999999999999999e-131  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1603  phenylalanyl-tRNA synthetase subunit beta  34.51 
 
 
795 aa  466  9.999999999999999e-131  Shewanella denitrificans OS217  Bacteria  normal  0.643795  n/a   
 
 
-
 
NC_012892  B21_01671  hypothetical protein  36.13 
 
 
795 aa  467  9.999999999999999e-131  Escherichia coli BL21  Bacteria  normal  0.0686641  n/a   
 
 
-
 
NC_011353  ECH74115_2431  phenylalanyl-tRNA synthetase subunit beta  36.13 
 
 
795 aa  468  9.999999999999999e-131  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.175376  normal 
 
 
-
 
NC_008321  Shewmr4_1809  phenylalanyl-tRNA synthetase subunit beta  34.95 
 
 
795 aa  467  9.999999999999999e-131  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2168  phenylalanyl-tRNA synthetase subunit beta  34.95 
 
 
795 aa  467  9.999999999999999e-131  Shewanella sp. MR-7  Bacteria  normal  0.0570245  normal 
 
 
-
 
NC_009439  Pmen_1981  phenylalanyl-tRNA synthetase subunit beta  36.33 
 
 
792 aa  467  9.999999999999999e-131  Pseudomonas mendocina ymp  Bacteria  normal  0.134276  normal  0.20776 
 
 
-
 
NC_010658  SbBS512_E1955  phenylalanyl-tRNA synthetase subunit beta  36.01 
 
 
795 aa  463  1e-129  Shigella boydii CDC 3083-94  Bacteria  normal  0.111711  n/a   
 
 
-
 
NC_007005  Psyr_2167  phenylalanyl-tRNA synthetase subunit beta  36.18 
 
 
792 aa  462  1e-129  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1404  phenylalanyl-tRNA synthetase, beta subunit  34.96 
 
 
795 aa  464  1e-129  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2597  phenylalanyl-tRNA synthetase subunit beta  34.59 
 
 
795 aa  463  1e-129  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0200655  normal 
 
 
-
 
NC_007520  Tcr_1662  phenylalanyl-tRNA synthetase, beta subunit  35.38 
 
 
793 aa  464  1e-129  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2107  phenylalanyl-tRNA synthetase subunit beta  36.36 
 
 
808 aa  463  1e-129  Polaromonas sp. JS666  Bacteria  normal  0.123782  normal  0.168772 
 
 
-
 
NC_009654  Mmwyl1_2592  phenylalanyl-tRNA synthetase, beta subunit  34.93 
 
 
794 aa  465  1e-129  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0126631 
 
 
-
 
NC_011138  MADE_02445  phenylalanyl-tRNA synthetase subunit beta  35.74 
 
 
795 aa  463  1e-129  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.202536  n/a   
 
 
-
 
NC_010501  PputW619_1972  phenylalanyl-tRNA synthetase subunit beta  36.03 
 
 
793 aa  463  1e-129  Pseudomonas putida W619  Bacteria  normal  normal  0.025038 
 
 
-
 
NC_008463  PA14_28710  phenylalanyl-tRNA synthetase subunit beta  36.41 
 
 
792 aa  463  1e-129  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.458463  decreased coverage  0.000000000220958 
 
 
-
 
NC_008782  Ajs_2395  phenylalanyl-tRNA synthetase subunit beta  35.59 
 
 
814 aa  462  1e-129  Acidovorax sp. JS42  Bacteria  normal  0.990048  normal 
 
 
-
 
NC_008577  Shewana3_1864  phenylalanyl-tRNA synthetase subunit beta  34.82 
 
 
795 aa  464  1e-129  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
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