| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3524 |
|---|
| Symbol | pheT |
|---|
| ID | 3836978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 4055308 |
|---|
| End bp | 4057710 |
|---|
| Gene Length | 2403 bp |
|---|
| Protein Length | 800 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637827646 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_428605 |
|---|
| Protein GI | 83594853 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCA CCATCGGCTG GCTCAAGGAC CACCTCGACA CCCAGGCCAG CGTGGCCGAT
ATCGCCGAAA AGCTGACGGC GCTCGGCCTG GAGGTCGACG CCATCGAAGA CCCGACAGCG
GCGCTGGCGC CCTTTGTCGT CGGCCATGTC ATCGAAGCCG GCCCCCATCC CGATGCCGAC
CGGCTGAAGC TCTGCCGGGT CGATAGCGGG ACGGATATTT TGCAGATCGT CTGCGGCGCC
CCCAACGCCC GCACCGGCCT GAAGGTGGCC CTGGCCCTGC CCGGCGCCGT CATCCCGGCC
ACCGGCGATG TGCTGAAGAA GGGCAAGATC CGCGGCATCG AAAGCCAGGG CATGATGTGC
TCGACCCGCG AATTGGGCCT GGGCGAGGAT CACGACGGCA TCATCGAACT GCCCGCCGAC
ACCCCCGTCG GCGTGCCGCT GGTCGATGTG CTGGCCCTTG ATCCGGTGAT CGACATCGCC
ATCACCCCCA ACCGCGCCGA CGCCCTGGGC GTGCGCGGCA TCGCCCGCGA TCTGGCCGCC
GGCGGCCTGG GCGGGGTGAT CGCCGACACG CTCACGGCGA TCCCCGGCCG CTTCCCCAGC
CCGATCGGCG TGGCGATCGA CCCGGAAACT CTGGCCAGCG GCGCCTGTAG CCACTATGTC
GGGCGGTACT TCCGGGGCGT GCGCAACGGC GAAAGCCCGG CTTGGCTCAA GGACCGGCTG
AACGCCATCG GCGTGCGGCC GATCAGCCTG CTGGTCGATA TCACCAATTA CGTCACCTTC
GACCGCGCCC GGCCGCTGCA TGTCTTCGAT GCCGACAAGC TGACCGGTAC GACGATCACC
GCCCGGCCGG CGCGCCAGGG CGAAATCCTG CGCGCCCTTG ATGGCCGCAG CTACACGCTT
GACGCCCCGG TGGTCGCCAT CGCCGATGGC GCCGGTCCCC AGGGGTTGGG CGGCATCATG
GGCGGCGAGG ACACGGGCGT TGACGAAAAC ACCGTCAATG TTTTCCTGGA ATCCGCCCTG
TTCGATCCGG CCAATACCGC CGCCGCCGGG CGCTTCCTCG GCATCGACTC CGACGCCCGC
TATCGGTTCG AGCGCGGCGT CGATCCCGAA AGCTGCCTGC TGGGCGCCGA GTTGGCGACG
CGGATGATCC TTGATCTGTG CGGCGGCGAG GCTAGCGAGC TGGTGATCGC CGGCGCCCCG
CCGGTTTGGC GGCGCACCAT CGCCCTGCGT CCGGCCCGCG TCGCCCGCCT GGGCGGCGTC
GCCGTCGAGC GCGCCGAGAT GGTGGCGAAA CTGCGCGCCC TGGGCTGCAC GGTCGAAGAC
GACGGCGCCG AGGCCCTGCG GGTCGACCCG CCGTCGTGGC GGGTCGATAT CGGCGCCGAA
CATGATCTGA TCGAGGAAGT CGTGCGCCTG CACGGCTTCG ATCTGGTCCC GGCCGTGCCG
TTGCCCCGCG ATCCGATGCC CAAGGCCGTG CTCACCCCCG GCCAACGGCG GATGATCACC
GTGAAGCGCA CCCTGGCGAC GCGCGGCATG CTTGAAGCGG TGACCTGGTC GTTCCTGCCG
CGCGCCGTGG CCAAAGGCTT TGGCGGTGGC CAGGACGCCT TGGTGCTGGC CAATCCGATC
AGCAGCGATC TCGACGCCAT GCGGCCGTCG ATCCTGCCCA ATCTGATTGC CGCCGCCGGC
CGCAACGCCG CGCGCGGCTA TGGCGACCTC GGGCTGTTCG AGGTTGGTCC GCGCTTCCAT
GGCGGCGAGC CCGGCCAGCA GACCCTGGTG GCCGCCGGCC TGCGCGCCGG CAAGATCGCC
CCCCGCCATT GGTCGCGGCC GGCGCGCGAT GCCGATCTGT ATGACATCAA GGCCGATGTG
CTGGCCGCGA TCGAGGCCGC CGGCGCGCCG ACGGCTTCGC TTCAAGTCAG CGCCGACGCC
CCGGCGTGGT TCCATCCCGG ACGGTCGGGG CAGATCCGCC TGGGCCGCAC CGTGCTCGCG
GCCTTCGGCG AGATCCATCC GGCGGCCTTG GCCCTGCTCG ACGTCAAGGG GCCGATGGTC
GGCTTCGAGC TTGATCTTGA TGCCCTGCCC TTGCCCAAGG GCCGGCCGAG CAAGACCCGG
CCGCCGCTGA CGCTGTCGCC CTTCCAGCCC GTCGCCCGCG ACTTCGCCTT CGTCGTCGAG
GCCGGGGTCG CCGGTGACGC GGTGATCAAG GCGGCGCGCG GCGCCGATAA GGCCTTGATC
ACCGACGTGG TGATCTTCGA CGTCTACCAA GGCGATCGCC TGGAAGCCGG GCGCAAATCC
CTGGCCCTGT CGGTCACCTT GCAGCCCACC GACCATACCC TGTCGGACGA GGAGATCGAG
GCGGTCTCGG CGCGCATCGT CGGCGCCGTC ACCAAGCTGA CCGGCGGCAG CCTGCGCAGC
TAA
|
|---|
| Protein sequence | MKFTIGWLKD HLDTQASVAD IAEKLTALGL EVDAIEDPTA ALAPFVVGHV IEAGPHPDAD
RLKLCRVDSG TDILQIVCGA PNARTGLKVA LALPGAVIPA TGDVLKKGKI RGIESQGMMC
STRELGLGED HDGIIELPAD TPVGVPLVDV LALDPVIDIA ITPNRADALG VRGIARDLAA
GGLGGVIADT LTAIPGRFPS PIGVAIDPET LASGACSHYV GRYFRGVRNG ESPAWLKDRL
NAIGVRPISL LVDITNYVTF DRARPLHVFD ADKLTGTTIT ARPARQGEIL RALDGRSYTL
DAPVVAIADG AGPQGLGGIM GGEDTGVDEN TVNVFLESAL FDPANTAAAG RFLGIDSDAR
YRFERGVDPE SCLLGAELAT RMILDLCGGE ASELVIAGAP PVWRRTIALR PARVARLGGV
AVERAEMVAK LRALGCTVED DGAEALRVDP PSWRVDIGAE HDLIEEVVRL HGFDLVPAVP
LPRDPMPKAV LTPGQRRMIT VKRTLATRGM LEAVTWSFLP RAVAKGFGGG QDALVLANPI
SSDLDAMRPS ILPNLIAAAG RNAARGYGDL GLFEVGPRFH GGEPGQQTLV AAGLRAGKIA
PRHWSRPARD ADLYDIKADV LAAIEAAGAP TASLQVSADA PAWFHPGRSG QIRLGRTVLA
AFGEIHPAAL ALLDVKGPMV GFELDLDALP LPKGRPSKTR PPLTLSPFQP VARDFAFVVE
AGVAGDAVIK AARGADKALI TDVVIFDVYQ GDRLEAGRKS LALSVTLQPT DHTLSDEEIE
AVSARIVGAV TKLTGGSLRS
|
|---|
| |