Gene Avi_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0209 
SymbolpheT 
ID7387526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp185825 
End bp188248 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content59% 
IMG OID643649914 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_002548131 
Protein GI222147174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.212777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA CACTCTCCTG GTTGAAAGAC CATCTGGACA CCGATGCCAC GCTGGATCAG 
GTCTGCGAGC GCCTTACCGC CATTGGCCTT GAAGTTGAGG ATGTTGATGA CAAGGCGGCC
TATAAGCCGT TTGTGATTGC CAAGATCCTC GCTGCGGAAA AGCATCCATC TGCCGATCGT
CTGAAAGTTC TCTCGGTTGA TGCTGGTGAT GGCAAGCCCG TGCAAGTGGT CTGCGGCGCG
CCGAATGCGC GGGCGGGCTT GATTGGCGCG TTTGGCCGTC CGGGCATGTA TGTGCCGGGG
CTGGATGTGA CGCTGGCGGT TGGCAATATT CGCGGCGTGG AAAGCCACGG CATGATGTGT
TCTGAAAAAG AACTCAACAT GTCTGACAAT CACGATGGCA TTATCGATCT GCCTGAAGAT
GCGCCTGTCG GTACCTCTTT CGCCGCCTAT GCAGGCATTG ATGATCCGAT GATCGAGATC
AATCTGACGC CAAACCGGCC CGATTGCACC AGCATTTTCG GCATTGCCCG TGATTTGGCC
GCCTCTGGCC TTGGCACGTT GAAGCAGCCA AAAGCTCCAA GCTTTGCGGT GGAAGGTGAG
ACCTCGGTTG AGGTCAAGCT GGAGCTGGAT GATGCCAAGC TGTGCCCCGG CTTTGCCTAT
CGCCTCGTGC ACGGCGTTAA AAATGGCCCA AGCCCGGTCT GGATGCAAAA GCGGCTGATT
GCCATTGGCC TTCGCCCGAT CTCGGCGCTG GTGGATGTGA CCAATTACAT GACCTTTGAT
CAAGGTCGGC CCATGCATGT GTTTGATGCC GATAAGGTCA AGGGTGTGCT GACCGTGCGC
CGTGCCAAGG ATGGCGAGGA AATTCTGGCC CTCGACACCC GCACCTATAA GCTGACACCC
AACACCGTGG TGATTGCCGA TGACAATGGC TTAGAATCCA TTGGCGGCAT CATGGGCGGC
GAGCATTCCG GCTGCGATGA AAACACCAGT AATGTGTTGA TTGAATCGGC CCTGTGGGAC
CCAATCAACA TTGCCAAATC GGGCCGCTCG CTGGGCATCA TCACCGATGC CCGCTATCGG
TTTGAGCGCG GTGTTGACCC AGAATATATG GTGCCCGGCC TTGAGCGCAC CACGGAACTG
GTGCTGGAAA TGTGCGGCGG AAAGGCTGCA AGCGCCAAGG TGGTTGGCTA TCAGGGCCAC
ACCAAGAAAG TGGTTGATTT CCCATTTTCC GAAGTCAAGC GCCTCACTGG CCTCAATGTT
TCCACCGACG AATCCCGCAC CATCCTCACC GGTCTTGGCT TTGAAGTGTC GGGCGAGGGC
GAAACCGTCA AGGTGGCTGT GCCATCATGG CGGCCAGATG TGGACGGCAA GGCCGATCTG
GTAGAAGAGG TCATGCGTAT GCATGGCGTG GATAAGATTA CGCCAGAGCC TCTACCATCG
ATGGGCGCGG TCAACACCAA AATCCTCACC ACCTTGCAGA TCCGCACCCG CACAGCTAAG
CGGGCGCTGG CCAGCCGTGG CATGATGGAA GCCGTGACGT GGTCGTTCAT CTCGGCAGAA
CAGGCCGCTT TGTTTGGTGG CGGCAAGCCG GAGCTGAAAC TGGTCAACCC GATTGCTGCT
GACATGTCGG ACATGCGCCC ATCGCTGCTG CCGGGTCTGC TCACCGCTGC CCAGCGCAAT
GCCGACCGTG GCTTTGGCGA TGTGGCGATT TTCGAAGTCT CCGGCACTTA TGAAGGCGAT
ACGCCCGAAG GCCAGCGTCG CGTGGCTGGC GGCGTGCGTC GTGGCACGGC ATCGCTCTCA
GGTGCTGGTC GTATGTGGTC CAACGCCACC AAGGGCGGCG GCAAGCCAGT GGATGTCTAT
GACGCCAAGG CCGATGCGCT GGCCGTGCTG GAAGCCTGCG GCCTGCCCAT GGGCAATGTG
CAGATCGAGC AGGGTGGCCC GGAATGGTAC CATCCGGGCC GCTCCGGCAC CATCAAGATG
GGTCCAAAGG TCGTGCTCGG CTACTTTGGC GAGTTCCACC CCAAGACGCT GGCCGCATTG
GATGTTTCCG GTACGCTCTG CGGCTTTGAG ATCTATCTCG ATGCCATGCA GGAGCCGAAG
AAGAAGGCCA CCCGCACCAA GCCTGCGCTG GATCTCTCGC CCTTGCAGAT GGTGAAGCGC
GATTTCGCCT TTGTGGTTGA GCGCTCCGTG GAAGCGGGCG CGATCATCAA GGCTGCCACC
AGCGCCGACC GCAAGCTGAT CACGGGCGTC AACGTGTTTG ACGTGTTTGA AGGGGCAAGC
GTTGGCGAAG GCAAGAAATC GGTGGCCATT GAAGTGCTGA TCCAACCATC GGACAAGACC
CTGACCGATG AGGATTTTGA CGCGCTGACC AAGAAGATCG TCGGCAATGT GGAGAAGACC
ACAGGCGGTG CGCTACGCGC CTGA
 
Protein sequence
MKFTLSWLKD HLDTDATLDQ VCERLTAIGL EVEDVDDKAA YKPFVIAKIL AAEKHPSADR 
LKVLSVDAGD GKPVQVVCGA PNARAGLIGA FGRPGMYVPG LDVTLAVGNI RGVESHGMMC
SEKELNMSDN HDGIIDLPED APVGTSFAAY AGIDDPMIEI NLTPNRPDCT SIFGIARDLA
ASGLGTLKQP KAPSFAVEGE TSVEVKLELD DAKLCPGFAY RLVHGVKNGP SPVWMQKRLI
AIGLRPISAL VDVTNYMTFD QGRPMHVFDA DKVKGVLTVR RAKDGEEILA LDTRTYKLTP
NTVVIADDNG LESIGGIMGG EHSGCDENTS NVLIESALWD PINIAKSGRS LGIITDARYR
FERGVDPEYM VPGLERTTEL VLEMCGGKAA SAKVVGYQGH TKKVVDFPFS EVKRLTGLNV
STDESRTILT GLGFEVSGEG ETVKVAVPSW RPDVDGKADL VEEVMRMHGV DKITPEPLPS
MGAVNTKILT TLQIRTRTAK RALASRGMME AVTWSFISAE QAALFGGGKP ELKLVNPIAA
DMSDMRPSLL PGLLTAAQRN ADRGFGDVAI FEVSGTYEGD TPEGQRRVAG GVRRGTASLS
GAGRMWSNAT KGGGKPVDVY DAKADALAVL EACGLPMGNV QIEQGGPEWY HPGRSGTIKM
GPKVVLGYFG EFHPKTLAAL DVSGTLCGFE IYLDAMQEPK KKATRTKPAL DLSPLQMVKR
DFAFVVERSV EAGAIIKAAT SADRKLITGV NVFDVFEGAS VGEGKKSVAI EVLIQPSDKT
LTDEDFDALT KKIVGNVEKT TGGALRA