Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0209 |
Symbol | pheT |
ID | 7387526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 185825 |
End bp | 188248 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649914 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_002548131 |
Protein GI | 222147174 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.212777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA CACTCTCCTG GTTGAAAGAC CATCTGGACA CCGATGCCAC GCTGGATCAG GTCTGCGAGC GCCTTACCGC CATTGGCCTT GAAGTTGAGG ATGTTGATGA CAAGGCGGCC TATAAGCCGT TTGTGATTGC CAAGATCCTC GCTGCGGAAA AGCATCCATC TGCCGATCGT CTGAAAGTTC TCTCGGTTGA TGCTGGTGAT GGCAAGCCCG TGCAAGTGGT CTGCGGCGCG CCGAATGCGC GGGCGGGCTT GATTGGCGCG TTTGGCCGTC CGGGCATGTA TGTGCCGGGG CTGGATGTGA CGCTGGCGGT TGGCAATATT CGCGGCGTGG AAAGCCACGG CATGATGTGT TCTGAAAAAG AACTCAACAT GTCTGACAAT CACGATGGCA TTATCGATCT GCCTGAAGAT GCGCCTGTCG GTACCTCTTT CGCCGCCTAT GCAGGCATTG ATGATCCGAT GATCGAGATC AATCTGACGC CAAACCGGCC CGATTGCACC AGCATTTTCG GCATTGCCCG TGATTTGGCC GCCTCTGGCC TTGGCACGTT GAAGCAGCCA AAAGCTCCAA GCTTTGCGGT GGAAGGTGAG ACCTCGGTTG AGGTCAAGCT GGAGCTGGAT GATGCCAAGC TGTGCCCCGG CTTTGCCTAT CGCCTCGTGC ACGGCGTTAA AAATGGCCCA AGCCCGGTCT GGATGCAAAA GCGGCTGATT GCCATTGGCC TTCGCCCGAT CTCGGCGCTG GTGGATGTGA CCAATTACAT GACCTTTGAT CAAGGTCGGC CCATGCATGT GTTTGATGCC GATAAGGTCA AGGGTGTGCT GACCGTGCGC CGTGCCAAGG ATGGCGAGGA AATTCTGGCC CTCGACACCC GCACCTATAA GCTGACACCC AACACCGTGG TGATTGCCGA TGACAATGGC TTAGAATCCA TTGGCGGCAT CATGGGCGGC GAGCATTCCG GCTGCGATGA AAACACCAGT AATGTGTTGA TTGAATCGGC CCTGTGGGAC CCAATCAACA TTGCCAAATC GGGCCGCTCG CTGGGCATCA TCACCGATGC CCGCTATCGG TTTGAGCGCG GTGTTGACCC AGAATATATG GTGCCCGGCC TTGAGCGCAC CACGGAACTG GTGCTGGAAA TGTGCGGCGG AAAGGCTGCA AGCGCCAAGG TGGTTGGCTA TCAGGGCCAC ACCAAGAAAG TGGTTGATTT CCCATTTTCC GAAGTCAAGC GCCTCACTGG CCTCAATGTT TCCACCGACG AATCCCGCAC CATCCTCACC GGTCTTGGCT TTGAAGTGTC GGGCGAGGGC GAAACCGTCA AGGTGGCTGT GCCATCATGG CGGCCAGATG TGGACGGCAA GGCCGATCTG GTAGAAGAGG TCATGCGTAT GCATGGCGTG GATAAGATTA CGCCAGAGCC TCTACCATCG ATGGGCGCGG TCAACACCAA AATCCTCACC ACCTTGCAGA TCCGCACCCG CACAGCTAAG CGGGCGCTGG CCAGCCGTGG CATGATGGAA GCCGTGACGT GGTCGTTCAT CTCGGCAGAA CAGGCCGCTT TGTTTGGTGG CGGCAAGCCG GAGCTGAAAC TGGTCAACCC GATTGCTGCT GACATGTCGG ACATGCGCCC ATCGCTGCTG CCGGGTCTGC TCACCGCTGC CCAGCGCAAT GCCGACCGTG GCTTTGGCGA TGTGGCGATT TTCGAAGTCT CCGGCACTTA TGAAGGCGAT ACGCCCGAAG GCCAGCGTCG CGTGGCTGGC GGCGTGCGTC GTGGCACGGC ATCGCTCTCA GGTGCTGGTC GTATGTGGTC CAACGCCACC AAGGGCGGCG GCAAGCCAGT GGATGTCTAT GACGCCAAGG CCGATGCGCT GGCCGTGCTG GAAGCCTGCG GCCTGCCCAT GGGCAATGTG CAGATCGAGC AGGGTGGCCC GGAATGGTAC CATCCGGGCC GCTCCGGCAC CATCAAGATG GGTCCAAAGG TCGTGCTCGG CTACTTTGGC GAGTTCCACC CCAAGACGCT GGCCGCATTG GATGTTTCCG GTACGCTCTG CGGCTTTGAG ATCTATCTCG ATGCCATGCA GGAGCCGAAG AAGAAGGCCA CCCGCACCAA GCCTGCGCTG GATCTCTCGC CCTTGCAGAT GGTGAAGCGC GATTTCGCCT TTGTGGTTGA GCGCTCCGTG GAAGCGGGCG CGATCATCAA GGCTGCCACC AGCGCCGACC GCAAGCTGAT CACGGGCGTC AACGTGTTTG ACGTGTTTGA AGGGGCAAGC GTTGGCGAAG GCAAGAAATC GGTGGCCATT GAAGTGCTGA TCCAACCATC GGACAAGACC CTGACCGATG AGGATTTTGA CGCGCTGACC AAGAAGATCG TCGGCAATGT GGAGAAGACC ACAGGCGGTG CGCTACGCGC CTGA
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Protein sequence | MKFTLSWLKD HLDTDATLDQ VCERLTAIGL EVEDVDDKAA YKPFVIAKIL AAEKHPSADR LKVLSVDAGD GKPVQVVCGA PNARAGLIGA FGRPGMYVPG LDVTLAVGNI RGVESHGMMC SEKELNMSDN HDGIIDLPED APVGTSFAAY AGIDDPMIEI NLTPNRPDCT SIFGIARDLA ASGLGTLKQP KAPSFAVEGE TSVEVKLELD DAKLCPGFAY RLVHGVKNGP SPVWMQKRLI AIGLRPISAL VDVTNYMTFD QGRPMHVFDA DKVKGVLTVR RAKDGEEILA LDTRTYKLTP NTVVIADDNG LESIGGIMGG EHSGCDENTS NVLIESALWD PINIAKSGRS LGIITDARYR FERGVDPEYM VPGLERTTEL VLEMCGGKAA SAKVVGYQGH TKKVVDFPFS EVKRLTGLNV STDESRTILT GLGFEVSGEG ETVKVAVPSW RPDVDGKADL VEEVMRMHGV DKITPEPLPS MGAVNTKILT TLQIRTRTAK RALASRGMME AVTWSFISAE QAALFGGGKP ELKLVNPIAA DMSDMRPSLL PGLLTAAQRN ADRGFGDVAI FEVSGTYEGD TPEGQRRVAG GVRRGTASLS GAGRMWSNAT KGGGKPVDVY DAKADALAVL EACGLPMGNV QIEQGGPEWY HPGRSGTIKM GPKVVLGYFG EFHPKTLAAL DVSGTLCGFE IYLDAMQEPK KKATRTKPAL DLSPLQMVKR DFAFVVERSV EAGAIIKAAT SADRKLITGV NVFDVFEGAS VGEGKKSVAI EVLIQPSDKT LTDEDFDALT KKIVGNVEKT TGGALRA
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