| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1709 |
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| Symbol | pheT |
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| ID | 4277734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2015984 |
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| End bp | 2018371 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134493 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_750397 |
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| Protein GI | 114562884 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.739174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA GTGAATCTTG GCTTCGTGAG TGGGTTAACC CATCAGTAAG TCGTGACGCA
TTATCACACC AAATCACCAT GGCCGGTCTT GAAGTTGATG GTATCGATGC CGTAGCTGCT
GATTTTAGCG GTGTTATTAT TGGTGAAGTG GTTGAATGTG GCCAACACCC AGATGCAGAC
AAATTACGCG TCACCAAAAT CAATGTTGGC GGCGATGAGC TTATCGACAT TGTTTGTGGT
GCACCAAACT GTCGTTTAGG CTTAAAAGTG GCTGTAGCAA TGGTTGGCGC TGTGTTACCT
GGCGATTTTA AAATTAAAAA AGCCAAGTTG CGCGGTCAAC CGTCAATGGG CATGTTGTGC
TCGTATGGCG AGTTAGGTAT CGACATCGAA AGCGATGGCA TTATTGAGCT ACCGACTGAT
GCACCAATCG GTGTCAATGT ACGTGAATTC TTGCAATTAG ATGACGCCAT TATTGATGTT
GATTTAACGG CTAACCGCGC TGATTGTTTA GGCATGGCAG GGCTTGCACG TGAAGTGGGT
GTATTAAATC GCCAAGCAGT GACAGAACCT TCTTGGGACG CGGTAACTGC CACGATTGAC
GCGCCATTTA GCATTAATGT TGTTGCACCA GATTTGTGCC CACGTTACTT AGGCCGTGTG
GTTAAAAACA TCAATGTTAA GGCTTCTACA CCATTATGGA TGCAAGAAAA ATTGCGTCGC
AGTGGTATTC GCTCAATTGA TCCAATCGTT GATATCACCA ACTATGTATT GATCGAATTT
GGTCAGCCAA TGCATGCGTT TGATTTAAAT ACCTTAAGCG GCGGTATTAC CGTACGTTTA
GCTGATGGTG TTGAAAAGCT AACCTTACTT GACGGCAACG AAATTACCGT TCCTAGCGAT
ACCTTAGTGA TTGCAGACGA CAAACAAGCG GTAGCGCTTG CGGGTGTGTT TGGCGGCGAA
AGTACTGGTG TGAATGAAAA CACTCAAGAC ATTCTTTTAG AGTGCGCCTT CTTTGCACCG
TTAGCCATTA TGGGTAAATC TCGTCGTTTA GGCTTACACA CAGACGCGTC ACACCGTTTT
GAGCGTGGTG TAGACCCTGA GCTGCAACAT AAGGTCATGG ACCGCGCTAC TCGCCTTGTA
TTGGATATCT GTGGTGGTGA AGCAGGGCAA GTGATTGAAG CGGTGTCTGC TGAGCATTTA
CCAACAGCGG CTAAAATAAC TCTGCGTCGT AGCAAGTTAG ATAAAACCTT AGGTCACTTT
ATTCCTGACT CTGACGTGGT TGAAATTCTA GAACGTTTAG GTTTTAGCGT GCAAACCAGC
GGTGATGTAT GGAATGTGAC AACCGCGACT TATCGTTTTG ATATGGCGAT TGAAGAAGAT
TTAATCGAAG AAGTTGCCCG TATTTACGGT TACAACAACA TTCCTAATAC CGCACCAAAA
GCGGCGTTAA GCATGCCAGA TCACAAAGAA GCGGATATTT CGTTAAAACG TGTGCGCAGT
ATCTTTGTGG CTCGAGGTTT CCAAGAAGCG GTTACCTACA GCTTTGTCGA CCCGAAGATG
CAGAACATTG TTCATCCTGG CGAAGAAGCG ATGGTGTTGC CTAACCCGAT TTCTGTCGAA
ATGTCAGCAA TGCGCTTATC AATGTTTACT GGTTTATTGA CCGCAGTAGG CTATAACCAG
AGCCGCCAGC AAAATAGAGT ACGTTTATTT GAGACAGGTT TACGCTTTGT TCCTGATGCA
CAAGCAGATT CTGGTGTTCG TCAACAAGCT ATGCTGGGCG CGGTTATTTC TGGTGCTCAA
AACGAAGAAC ATTGGTCAAT GGAATCGAAA ACAGTCGACT TCTTTGATTT AAAAGGTGAT
TTAGAAGCAA TAATCGGCTT GACAGTTGCC TCTACAGAAT TTAGCTTTAG AGGGGCAACA
CATCCTGCGC TGCATCCAGG TCAATGTGCT GAAATATTAC GAAATAATCG AGTCATTGGT
TACATCGGTG CTATCCATCC TAGTTTGGAA AAGCCGTTTG GACTCAATGG AAAAACAATT
GTTTTTGAGT TAGAACTGGA TGCATTATTG CACGCCCGTT TGCCGCTAGC CCAAGCTGTG
TCTAAGTTTC CTGCCAATCG CCGCGACATC GCGGTAGTAG TAGATGAAAC AGTTTCTGCA
ACTGATGTTA TGAATTTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CTTAAACTTG
TTCGATGTAT ACCAAGGTAA AGGTGTTGAG CCAGGCAAAA AGAGCCTAGC CATCGCACTT
ACGTTACAAG ACACTACTCG TACACTTGAA GATAAAGATA TTACTGAGAC TATGGAATCA
GTGGTATCGG CTCTAAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
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| Protein sequence | MKFSESWLRE WVNPSVSRDA LSHQITMAGL EVDGIDAVAA DFSGVIIGEV VECGQHPDAD
KLRVTKINVG GDELIDIVCG APNCRLGLKV AVAMVGAVLP GDFKIKKAKL RGQPSMGMLC
SYGELGIDIE SDGIIELPTD APIGVNVREF LQLDDAIIDV DLTANRADCL GMAGLAREVG
VLNRQAVTEP SWDAVTATID APFSINVVAP DLCPRYLGRV VKNINVKAST PLWMQEKLRR
SGIRSIDPIV DITNYVLIEF GQPMHAFDLN TLSGGITVRL ADGVEKLTLL DGNEITVPSD
TLVIADDKQA VALAGVFGGE STGVNENTQD ILLECAFFAP LAIMGKSRRL GLHTDASHRF
ERGVDPELQH KVMDRATRLV LDICGGEAGQ VIEAVSAEHL PTAAKITLRR SKLDKTLGHF
IPDSDVVEIL ERLGFSVQTS GDVWNVTTAT YRFDMAIEED LIEEVARIYG YNNIPNTAPK
AALSMPDHKE ADISLKRVRS IFVARGFQEA VTYSFVDPKM QNIVHPGEEA MVLPNPISVE
MSAMRLSMFT GLLTAVGYNQ SRQQNRVRLF ETGLRFVPDA QADSGVRQQA MLGAVISGAQ
NEEHWSMESK TVDFFDLKGD LEAIIGLTVA STEFSFRGAT HPALHPGQCA EILRNNRVIG
YIGAIHPSLE KPFGLNGKTI VFELELDALL HARLPLAQAV SKFPANRRDI AVVVDETVSA
TDVMNLIRKV GENQLVGLNL FDVYQGKGVE PGKKSLAIAL TLQDTTRTLE DKDITETMES
VVSALKTEFN ASLRD
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