Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28710 |
Symbol | pheT |
ID | 4380753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2471477 |
End bp | 2473855 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324877 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_790450 |
Protein GI | 116050729 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.458463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000000220958 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAATTCA GTGAAAAGTG GCTGCGGAGC TGGGCAAATC CGCAGGTTTC CCATGACGAG CTGGTCGCTC GCCTGTCCAT GGTCGGCCTC GAGGTCGACG CCGACCTGCC GGTCGCCGGC GCCTTCAGCG GCGTGGTGGT CGGCGAGGTG CTCTCGACCG AACAGCATCC GGACGCCGAC AAGCTGCGCG TCTGCCAGGT CAGCAACGGC AGCGAGACCT TCCAGGTCGT CTGCGGCGCG CCCAACGTGC GCGCGGGCCT GAAGATTCCC TTCGCCATGA TCGGCGCCGA ACTGCCGGGC GACTTCAAGA TCAAGAAAGC CAAGCTGCGT GGCGTCGAGT CCTTCGGCAT GCTCTGCTCG GCCAAGGAAT TGCAGATCAG CGAAGAGAAC GCCGGTCTGC TCGAGCTGCC GGCTGACGCG CCGGTCGGCC AGGACGTCCG CACCTACCTG GAGCTGGACG ACTACACCAT CGAGGTCGGC CTGACCCCGA ACCGCGGTGA CTGCCTGTCG CTCGCCGGCC TGGCCCGCGA AGTCAGCGCC ATCTACGACG TACCGCTGGC GCCGGTGGCG GTGGATGCGG TCGCCGCGCA GCACGACGAG ACCCGTCCGG TCGAACTCGA CGCGCCGGCC GCCTGCCCGC GCTATCTCGG CCGGGTGATC CGCAACGTCG ACCTGAGCCG GCCGACCCCG TTGTGGATGG TCGAGCGCCT GCGCCGTTCC GACATTCGCA GTATCGACCC GGTGGTCGAC GTCACCAACT ACGTGATGAT CGAACTGGGC CAGCCGATGC ATGCCTTCGA CCTTGCCGAG ATCAACGGCG GCGTGCGCGT GCGCATGGCC GAGGACGGCG AGAAGCTGGT CCTGCTCGAC GGCCAGGAAA TCACCCTGCG CGCCGACACC CTGGTGATCG CCGACCACCA GCGCGCCCTG GCCATCGCCG GGGTGATGGG TGGTGAGCAC AGCGGCGTCA GCGACAGCAC CCGCGACCTG TTCCTCGAAG CCGCGTTCTT CGACACCATC GCCCTGGCCG GCAAGGCTCG CTCCTATGGC CTGCACACCG ACTCCTCGCA TCGCTTCGAG CGCGGCGTCG ACAGCCAGCT GGCGCGCAAG GCCATGGAGC GCGCGACGCG CCTGATCCTC GACATCGTCG GCGGCGAGCC GGGGCCGATC GTCGAGCAGG TCAGCGAAGC GCACCTGCCG AAGGTAGCGC CGATCACCCT GCGCGCCGAG CGCGTGACCC AGATGCTCGG CATGCCGCTG GACGCCGCCG AGATCGTGCG CCTGCTGCAA GCCCTGGAGC TGACGGTGGT AGCCGACGGG GAAGGGCAGT GGTCGGTCGG CGTACCGAGC CATCGCTTCG ACATTTCCCT GGAAGTCGAC CTGATCGAGG AACTGGCCCG TCTCTACGGC TACAACCGCT TGCCGGTGCG CTACCCGCAG GCGCGCCTGG CGCCGAACAA CAAGCCGGAA GCGCGCGCCG CGCTGCCGCT GCTGCGGCGC CTGCTGGTCG CCCGCGGCTA CCAGGAAGCG ATCACCTTCA GCTTCATCGA TCCGGCCCTG TTCGAACTGT TCGATCCGGG CACCCAGCCG CTGACCCTGG CCAACCCGAT CTCCGCCGAC ATGGCGGCGA TGCGTTCCAG TCTCTGGCCG GGCCTGGTCA AGGCGCTGCA GCACAACCTC AACCGCCAGC AGTCGCGGGT CCGCCTGTTC GAAAGCGGCC TGCGCTTCGT CGGTCAACTG GAAAGCTTGA AGCAGGAAGC CATGCTCGCC GGCGCCATCT GCGGCAAGCG CCTGCCGGAA GGCTGGGCCA ACGGCCGTGA CGGCGTGGAC TTCTTCGACG CCAAGGCCGA TGTCGAGGCA GTGTTGGCCA GTGCCGGCGC CCTCGGCGAC TTCAGCTTCG TGCCCGGTGA GCACCCGGCG CTGCACCCGG GGCAGACCGC GCGCATCGAG CGGGAAGGGC GGCTGGTCGG CTACCTGGGC GCGCTGCATC CGGAACTGGC GAAGAAACTC GACCTCGAGC AGCCGGTGTT CCTCTTCGAG CTGCTGTTGG CCGAAGTGGT CGACGGCCAC CTGCCGAAGT TCCGCGAGCT GTCGCGCTTC CCCGAAGTAC GCCGCGACCT GGCGCTGCTG GTGGACCAGG ACGTGCCGGC GCAAGACATC CTGACACAAA TCCGTGCGGC GGCCGGCGAA TGGCTGACGG ACCTCAGGCT GTTTGATGTG TATCACGGTA AAGGCATTGA TCCGCATAGA AAAAGCCTTG CCGTCGGCTT GACCTGGCAG CATCCATCGC GCACTCTTAA TGACGATGAA GTCAATAGCA CGACGCAGAA CATCGTCACG TCGTTGGAAG AAAGGTTCAA TGCCACGTTA AGGAAATAG
|
Protein sequence | MKFSEKWLRS WANPQVSHDE LVARLSMVGL EVDADLPVAG AFSGVVVGEV LSTEQHPDAD KLRVCQVSNG SETFQVVCGA PNVRAGLKIP FAMIGAELPG DFKIKKAKLR GVESFGMLCS AKELQISEEN AGLLELPADA PVGQDVRTYL ELDDYTIEVG LTPNRGDCLS LAGLAREVSA IYDVPLAPVA VDAVAAQHDE TRPVELDAPA ACPRYLGRVI RNVDLSRPTP LWMVERLRRS DIRSIDPVVD VTNYVMIELG QPMHAFDLAE INGGVRVRMA EDGEKLVLLD GQEITLRADT LVIADHQRAL AIAGVMGGEH SGVSDSTRDL FLEAAFFDTI ALAGKARSYG LHTDSSHRFE RGVDSQLARK AMERATRLIL DIVGGEPGPI VEQVSEAHLP KVAPITLRAE RVTQMLGMPL DAAEIVRLLQ ALELTVVADG EGQWSVGVPS HRFDISLEVD LIEELARLYG YNRLPVRYPQ ARLAPNNKPE ARAALPLLRR LLVARGYQEA ITFSFIDPAL FELFDPGTQP LTLANPISAD MAAMRSSLWP GLVKALQHNL NRQQSRVRLF ESGLRFVGQL ESLKQEAMLA GAICGKRLPE GWANGRDGVD FFDAKADVEA VLASAGALGD FSFVPGEHPA LHPGQTARIE REGRLVGYLG ALHPELAKKL DLEQPVFLFE LLLAEVVDGH LPKFRELSRF PEVRRDLALL VDQDVPAQDI LTQIRAAAGE WLTDLRLFDV YHGKGIDPHR KSLAVGLTWQ HPSRTLNDDE VNSTTQNIVT SLEERFNATL RK
|
| |