| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3247 |
|---|
| Symbol | |
|---|
| ID | 6198929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3690289 |
|---|
| End bp | 3692709 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641707196 |
|---|
| Product | phenylalanyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_001834296 |
|---|
| Protein GI | 182680150 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CGCTTTCCTG GTTGAAGGAT CATCTCGAGA CCGAGGCCAC TCTCCCGAAA
ATCGTCGAGA CCTTGACGGA TATCGGGCTC GAGGTCGAGG CGGTCGAGGA CCCCGCGAAG
GATTTGCACA ATTTCATTAT CGCTGCCGTC CTCGAAGCCG AACCGCATCC CAATGCCGAT
CGCCTGCGCG TCTGTCGTGT CGATATCGGC GATGGCAAGC CCGTCCAGGT GGTCTGCGGC
GCGCCCAATG CCCGGGCCGG CATGAAATCA GTCTTCTCGC CGCCCGGCAC CTATATTCCC
GGCAAAAAAA TCACGCTCGG CAAGGGCGTC ATCCGCGGTG TCGAATCGGA CGGCATGCTG
TGCTCGGGCG CCGAACTCGG CCTCTCCGAG GATCATGACG GTATTCTCGA TCTTCCCGCC
GATGCTCCAG TCGGCCAGCC CTATGCAGTC TATGCCGGGC TCGATGATCC GGTCATTGAC
ATCAATCTCC TCCCGAACCG GCCCGATGCC ATGGGCGTTG CCGGCATTGC GCGCGATCTT
GCCGCCGCCA ATCTCGGCGC GCTCAAGACA CCCCGCATTG CACCGATCAC AGGCGTCTTC
GACGCCTCTG TCGAGGCGCG CATCGATTTG CCGTCCGAGA AGGCAGCGCT TTGTCCGGTC
TTCGCTTTGC GTCTGGTGCG CAATGTCCGC AATGGACCGA GCCCGGAATG GCTGCAAAAG
CGCCTGAAAG CCATTGGCCT GCGGCCGATC AATGCCCTTG TCGACATCAC CAACTTCCTC
GCCTTCGACC GGGCGCGGCC GCTGCATGTC TTCGATGCCG ATAAAATTTC AGGCGCCATA
GCGGTCCGGC TGGCGAAAGC CGGCGAAAGC CTCGTGGCGC TCGACGGCAA AACCTATCCG
CTCGCCGAGA CCATGGTCGT CATCGCCGAT GACAATGGCG TCGAATCCTT GGCCGGTATC
ATGGGTGGCG CGGCCTCCGG CTGCGACGAG AACACCAAAA ATGTGCTGAT CGAATCTGCG
CTTTGGGACC CGGTCAATAT CGCCCGCAGC GGCCGCGCGC TGGGGATCAA TACGGATGCC
CGCTATCGTT TCGAACGCGG CATCGATCCC GCCTTCACTC TGCCGGGTCT CGATCTCGCA
ACGGCATTGG TGCAGGAATT TTGCGGCGGC GAACCCTCAA AGACAATCAT CAAGGGGGAG
GTGCCGCAGC ACGACACCTA TATTCAATTC CCCTGGAGCG AGGTCACCCG CCTGACCGGT
GTCGAACTCG ATCCGTCCAC CATGGCGGGC ATTCTGGAAA ATCTCGGCTT CGCGCTCTCC
GTGTCGCCTG GCAACAGCAA TCTGGTTCTC GTCAGGGCGC CAAGCTTTCG CCCCGATATC
GAGGGCAAGG CCGATATTGT CGAAGAGATC ATCCGCGTCG CGGGCCTCGA CAAGGTCGCC
TCGCAGCCTT TGCCGGCCGA GGGTGCCCCC CTTGCCTCCC CCGTGCTGAC CCTCGCGCAA
AAACGCGCCC GCGCGGCCAA ACGATCGCTC GCCGCCAATG GCCTTGTCGA AGCGGTCACG
TGGTCCTTCA TCGACAAAAC GCAAGCGGGC CTGTTCGGCG GTGGCGGCAC CTCGACGACG
CTCGCCAATC CGATCAGCGC CGATCTCTCG GCCATGCGGC CGAGCCTTTT GCCCGGTTTG
CTCGCGGCCG CCAAGCGCAA CAGGGCGCGC GGCTTCGCCG ACATCGCTCT CTTCGAGGTC
GGACAGATCT TTCTGGGTGA TGGCGAGAAG GATCAGAAAA CCGCCGCGAC CGGTATCCGC
CAGGGGCTTG CCCAAGAGAA ACATTGGTCG GCATCCGCCA AGCCGGTCGA TGCCTTTCTG
GCCAAGGGCG ATGCCATGGC TTTGTTGACG GCCCTCGGCG TCTCGCTCGG CGGTCTCCAG
ATCGTGCCCG GTGGCGCCGA TATCTGGCAT CCAGGCCGCT CGGCCACTTT GCAATTCGGT
CCCAAAAATA TCATTGGCAC TTTTGGCGAG CTCAATCCGC GTCTCCTCGC GGCGCTCGAT
ATGGAGGGGC CGGTGGTGGG CTTCGAGATC AGGCTCGATG CTTTGCCGCT TCCCAAAGCG
AAACCGACAA AGGCCAAATC CAAACTCGAT CTTTCCGATT TCATGCCCTT ACGGCGTGAT
TTCGCTTTCG TCGTCGATCG GCAAGTCAAG GCCGCCGATC TCGTGAAAGC GGTCCAGGGC
GCCGAACGCG CATTGCTCGC CGATGTCGAT GTCTTCGACG TCTATGAAGG CAAAGGCATA
GCGGACGACA AAAAATCGGT TGGCATTACG GTGGTTTTAC AACCCCGCGA AAAAACCCTG
ACCGAGGCGG AAATCGAGGC CATCGCGTCC AAGATCGTCA CCGAGGTAGG CAAGAAGACC
GGCGCGGTTT TGCGGGCATA A
|
|---|
| Protein sequence | MKFTLSWLKD HLETEATLPK IVETLTDIGL EVEAVEDPAK DLHNFIIAAV LEAEPHPNAD
RLRVCRVDIG DGKPVQVVCG APNARAGMKS VFSPPGTYIP GKKITLGKGV IRGVESDGML
CSGAELGLSE DHDGILDLPA DAPVGQPYAV YAGLDDPVID INLLPNRPDA MGVAGIARDL
AAANLGALKT PRIAPITGVF DASVEARIDL PSEKAALCPV FALRLVRNVR NGPSPEWLQK
RLKAIGLRPI NALVDITNFL AFDRARPLHV FDADKISGAI AVRLAKAGES LVALDGKTYP
LAETMVVIAD DNGVESLAGI MGGAASGCDE NTKNVLIESA LWDPVNIARS GRALGINTDA
RYRFERGIDP AFTLPGLDLA TALVQEFCGG EPSKTIIKGE VPQHDTYIQF PWSEVTRLTG
VELDPSTMAG ILENLGFALS VSPGNSNLVL VRAPSFRPDI EGKADIVEEI IRVAGLDKVA
SQPLPAEGAP LASPVLTLAQ KRARAAKRSL AANGLVEAVT WSFIDKTQAG LFGGGGTSTT
LANPISADLS AMRPSLLPGL LAAAKRNRAR GFADIALFEV GQIFLGDGEK DQKTAATGIR
QGLAQEKHWS ASAKPVDAFL AKGDAMALLT ALGVSLGGLQ IVPGGADIWH PGRSATLQFG
PKNIIGTFGE LNPRLLAALD MEGPVVGFEI RLDALPLPKA KPTKAKSKLD LSDFMPLRRD
FAFVVDRQVK AADLVKAVQG AERALLADVD VFDVYEGKGI ADDKKSVGIT VVLQPREKTL
TEAEIEAIAS KIVTEVGKKT GAVLRA
|
|---|
| |