Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1809 |
Symbol | pheT |
ID | 4252383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2147649 |
End bp | 2150036 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118420 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_733940 |
Protein GI | 113970147 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA GCGAATCTTG GCTTCGTGAG TGGGTCAATC CTGCCGTTAG CCGTGAAGCA TTATCCCACC AGATCACTAT GGCTGGCCTC GAAGTCGATG GCGTTGATGC CGTGGCTGCC GAGTTCAACG GCGTTGTGAT TGGTGAAGTG GTCGAATGTG GCCAGCATCC AGATGCAGAT AAACTGCGCG TGACTAAAGT CAGTGTCGGC AGTGGTGAAC TTATCGATAT CGTCTGCGGC GCACCAAACT GCCGTCAAGG CCTGCGCGTT GCTGTTGCCA TGGTTGGGGC TGTACTGCCA GGCGATTTTA AAATTAAAAA GGCTAAGCTG CGTGGTATGC CATCAGAAGG CATGCTGTGT TCTTACAGCG AGCTGGGCAT CGACATCGAC AGCGATGGCA TTATCGAACT GCCATTAGAT GCGCCATTAG GCACGGATTT ACGTGAGTAT CTCCAGCTTG ATGATGCTGT GATTGAAGTG GATTTAACCG CTAACCGTGC CGACTGTTTA GGCATGGTGG GTCTGGCCCG TGAAGTCGGC GTGTTAAACC GTGCAGCTGT GACTGAGCCA CAATGGCAAG CCGTTACGCC AACGATTGAT GCCAAAGTGG CTATCAATGT TAAGGAAACC GCAGCTTGCC CACGCTACTT AGGTCGTGTG GTGAAGAATG TGAACGTGAA AGCGGCTACG CCATTATGGA TGCAGGAAAA ACTGCGCCGC AGCGGTATCC GTTCTATCGA TCCTATCGTC GATATCACTA ACTTCGTGTT AGTTGAATTC GGTCAACCTA TGCATGCGTT CGATCTTGCC AAACTTACTG GTGACATCCA AGTGCGTTTA GGCAATGGCG AAGAGAAAGT CACCCTGCTC GATGGCAGCG AAGTCACCAT TCCAAGCGAC ACTTTAGTGA TTGCCGACGA TGCTCGCCCA TTAGCGCTTG CTGGCGTATT TGGTGGCGAA TATTCGGGTG TGAGTGACAG CACGCAAGAC ATTCTGCTGG AATGTGCCTT CTTCGCACCG TTAGCGATTA TGGGTAAATC ACGCCGTTTA GGTCTGCATA CTGATTCATC ACACCGTTTC GAGCGTGGTG TTGACCCTGA GATGCAGCAT AAGGTTATGG ACCGTGCGAC TCGCTTAGTG CTGGATATTT GCGGCGGGGA AGCGGGCCCT GTGGTTGAAG CCAAATCTGA CGCTGACTTA CCAAAGCCTG CGCAAATCTT ATTGCGTCGC AGCAAGTTAG ATAAAATTCT GGGTCACCAT GTTCCCGATA GCGACGTGGT TGAAATCCTC GAGCGTTTAG GTTTCGGCGT CGTTGCAGGC GAAGGTAGCT GGCAGGTCAC CACCGCCACT TACCGCTTCG ATATGGCGAT TGAAGAAGAC TTAATCGAAG AAGTCGCCCG TATCTACGGT TACAACAACA TTCCAAACGT TGCGCCTGTG GCGTCACTGC GGATGTCAGA TCATAAAGAA ACCGACTTAA GCCTCAAGCG TGTACGTTCG CTGTTAGTGG CCCGTGGTTT CCAAGAAGCT GTGACTTACA GTTTCGTCGA TCCTAAGCTG CAAAATCTGG TTCACCCAGG TGAGCAAGCA ATGGTGTTAC CGAACCCAAT TTCCAGCGAA ATGTCGGCCA TGCGTTTGTC GATGTTCACA GGATTATTGA CTGCGGTTGG CTACAACCAA AGTCGTCAAC AGGGCCGTGT GAGACTTTTT GAAACTGGCC TTCGCTTTGT TCCTGATATT AATGCAGAAT CGGGTGTAAG ACAGCAAGCT ATGCTCGGTT GCGTCATAAC TGGCCTCCAA AATGACGAAC ATTGGGCTAT GGAATCGAAA ACTGTTGATT TTTTCGACCT TAAAGGCGAT TTAGAAGCAA TTATCGGCTT GACAGTTTCC GCATCAGAAT TTAGCTTTAG AGTAGCGACG CATTCTGCTC TTCATCCAGG GCAATGTGCT GAAATATTGA GAAATGATCG AGTGATCGGT CATATAGGTG CTATCCATCC TAGTTTGGAG AAGCCTTTTG GACTCAATGG TAAAACCATC GTTTTTGAGT TGGAATTGGA TGCTTTATTG CATACCAGTT TACCGCTAGC CCAAGCTGTA TCTAAGTTCC CGGCTAATCG TCGTGACATC GCAGTAGTCG TAGATGAAAG TGTATCTGCA GGCGATGTAA TGAAATTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG TTCGATGTAT ACTTAGGTAA AGGTGTTGAG CCCGGCAAGA AGAGCTTGGC GATAGCACTT ACATTACAAG ACACTACTCG TACACTTGAG GAAAAAGAGA TCGCTGAGAC AGTTGAATCA GTTGTTTCTG CCCTGAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
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Protein sequence | MKFSESWLRE WVNPAVSREA LSHQITMAGL EVDGVDAVAA EFNGVVIGEV VECGQHPDAD KLRVTKVSVG SGELIDIVCG APNCRQGLRV AVAMVGAVLP GDFKIKKAKL RGMPSEGMLC SYSELGIDID SDGIIELPLD APLGTDLREY LQLDDAVIEV DLTANRADCL GMVGLAREVG VLNRAAVTEP QWQAVTPTID AKVAINVKET AACPRYLGRV VKNVNVKAAT PLWMQEKLRR SGIRSIDPIV DITNFVLVEF GQPMHAFDLA KLTGDIQVRL GNGEEKVTLL DGSEVTIPSD TLVIADDARP LALAGVFGGE YSGVSDSTQD ILLECAFFAP LAIMGKSRRL GLHTDSSHRF ERGVDPEMQH KVMDRATRLV LDICGGEAGP VVEAKSDADL PKPAQILLRR SKLDKILGHH VPDSDVVEIL ERLGFGVVAG EGSWQVTTAT YRFDMAIEED LIEEVARIYG YNNIPNVAPV ASLRMSDHKE TDLSLKRVRS LLVARGFQEA VTYSFVDPKL QNLVHPGEQA MVLPNPISSE MSAMRLSMFT GLLTAVGYNQ SRQQGRVRLF ETGLRFVPDI NAESGVRQQA MLGCVITGLQ NDEHWAMESK TVDFFDLKGD LEAIIGLTVS ASEFSFRVAT HSALHPGQCA EILRNDRVIG HIGAIHPSLE KPFGLNGKTI VFELELDALL HTSLPLAQAV SKFPANRRDI AVVVDESVSA GDVMKLIRKV GENQLVGINL FDVYLGKGVE PGKKSLAIAL TLQDTTRTLE EKEIAETVES VVSALKTEFN ASLRD
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