Gene Shewmr4_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1809 
SymbolpheT 
ID4252383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2147649 
End bp2150036 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content49% 
IMG OID638118420 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_733940 
Protein GI113970147 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA GCGAATCTTG GCTTCGTGAG TGGGTCAATC CTGCCGTTAG CCGTGAAGCA 
TTATCCCACC AGATCACTAT GGCTGGCCTC GAAGTCGATG GCGTTGATGC CGTGGCTGCC
GAGTTCAACG GCGTTGTGAT TGGTGAAGTG GTCGAATGTG GCCAGCATCC AGATGCAGAT
AAACTGCGCG TGACTAAAGT CAGTGTCGGC AGTGGTGAAC TTATCGATAT CGTCTGCGGC
GCACCAAACT GCCGTCAAGG CCTGCGCGTT GCTGTTGCCA TGGTTGGGGC TGTACTGCCA
GGCGATTTTA AAATTAAAAA GGCTAAGCTG CGTGGTATGC CATCAGAAGG CATGCTGTGT
TCTTACAGCG AGCTGGGCAT CGACATCGAC AGCGATGGCA TTATCGAACT GCCATTAGAT
GCGCCATTAG GCACGGATTT ACGTGAGTAT CTCCAGCTTG ATGATGCTGT GATTGAAGTG
GATTTAACCG CTAACCGTGC CGACTGTTTA GGCATGGTGG GTCTGGCCCG TGAAGTCGGC
GTGTTAAACC GTGCAGCTGT GACTGAGCCA CAATGGCAAG CCGTTACGCC AACGATTGAT
GCCAAAGTGG CTATCAATGT TAAGGAAACC GCAGCTTGCC CACGCTACTT AGGTCGTGTG
GTGAAGAATG TGAACGTGAA AGCGGCTACG CCATTATGGA TGCAGGAAAA ACTGCGCCGC
AGCGGTATCC GTTCTATCGA TCCTATCGTC GATATCACTA ACTTCGTGTT AGTTGAATTC
GGTCAACCTA TGCATGCGTT CGATCTTGCC AAACTTACTG GTGACATCCA AGTGCGTTTA
GGCAATGGCG AAGAGAAAGT CACCCTGCTC GATGGCAGCG AAGTCACCAT TCCAAGCGAC
ACTTTAGTGA TTGCCGACGA TGCTCGCCCA TTAGCGCTTG CTGGCGTATT TGGTGGCGAA
TATTCGGGTG TGAGTGACAG CACGCAAGAC ATTCTGCTGG AATGTGCCTT CTTCGCACCG
TTAGCGATTA TGGGTAAATC ACGCCGTTTA GGTCTGCATA CTGATTCATC ACACCGTTTC
GAGCGTGGTG TTGACCCTGA GATGCAGCAT AAGGTTATGG ACCGTGCGAC TCGCTTAGTG
CTGGATATTT GCGGCGGGGA AGCGGGCCCT GTGGTTGAAG CCAAATCTGA CGCTGACTTA
CCAAAGCCTG CGCAAATCTT ATTGCGTCGC AGCAAGTTAG ATAAAATTCT GGGTCACCAT
GTTCCCGATA GCGACGTGGT TGAAATCCTC GAGCGTTTAG GTTTCGGCGT CGTTGCAGGC
GAAGGTAGCT GGCAGGTCAC CACCGCCACT TACCGCTTCG ATATGGCGAT TGAAGAAGAC
TTAATCGAAG AAGTCGCCCG TATCTACGGT TACAACAACA TTCCAAACGT TGCGCCTGTG
GCGTCACTGC GGATGTCAGA TCATAAAGAA ACCGACTTAA GCCTCAAGCG TGTACGTTCG
CTGTTAGTGG CCCGTGGTTT CCAAGAAGCT GTGACTTACA GTTTCGTCGA TCCTAAGCTG
CAAAATCTGG TTCACCCAGG TGAGCAAGCA ATGGTGTTAC CGAACCCAAT TTCCAGCGAA
ATGTCGGCCA TGCGTTTGTC GATGTTCACA GGATTATTGA CTGCGGTTGG CTACAACCAA
AGTCGTCAAC AGGGCCGTGT GAGACTTTTT GAAACTGGCC TTCGCTTTGT TCCTGATATT
AATGCAGAAT CGGGTGTAAG ACAGCAAGCT ATGCTCGGTT GCGTCATAAC TGGCCTCCAA
AATGACGAAC ATTGGGCTAT GGAATCGAAA ACTGTTGATT TTTTCGACCT TAAAGGCGAT
TTAGAAGCAA TTATCGGCTT GACAGTTTCC GCATCAGAAT TTAGCTTTAG AGTAGCGACG
CATTCTGCTC TTCATCCAGG GCAATGTGCT GAAATATTGA GAAATGATCG AGTGATCGGT
CATATAGGTG CTATCCATCC TAGTTTGGAG AAGCCTTTTG GACTCAATGG TAAAACCATC
GTTTTTGAGT TGGAATTGGA TGCTTTATTG CATACCAGTT TACCGCTAGC CCAAGCTGTA
TCTAAGTTCC CGGCTAATCG TCGTGACATC GCAGTAGTCG TAGATGAAAG TGTATCTGCA
GGCGATGTAA TGAAATTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG
TTCGATGTAT ACTTAGGTAA AGGTGTTGAG CCCGGCAAGA AGAGCTTGGC GATAGCACTT
ACATTACAAG ACACTACTCG TACACTTGAG GAAAAAGAGA TCGCTGAGAC AGTTGAATCA
GTTGTTTCTG CCCTGAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
 
Protein sequence
MKFSESWLRE WVNPAVSREA LSHQITMAGL EVDGVDAVAA EFNGVVIGEV VECGQHPDAD 
KLRVTKVSVG SGELIDIVCG APNCRQGLRV AVAMVGAVLP GDFKIKKAKL RGMPSEGMLC
SYSELGIDID SDGIIELPLD APLGTDLREY LQLDDAVIEV DLTANRADCL GMVGLAREVG
VLNRAAVTEP QWQAVTPTID AKVAINVKET AACPRYLGRV VKNVNVKAAT PLWMQEKLRR
SGIRSIDPIV DITNFVLVEF GQPMHAFDLA KLTGDIQVRL GNGEEKVTLL DGSEVTIPSD
TLVIADDARP LALAGVFGGE YSGVSDSTQD ILLECAFFAP LAIMGKSRRL GLHTDSSHRF
ERGVDPEMQH KVMDRATRLV LDICGGEAGP VVEAKSDADL PKPAQILLRR SKLDKILGHH
VPDSDVVEIL ERLGFGVVAG EGSWQVTTAT YRFDMAIEED LIEEVARIYG YNNIPNVAPV
ASLRMSDHKE TDLSLKRVRS LLVARGFQEA VTYSFVDPKL QNLVHPGEQA MVLPNPISSE
MSAMRLSMFT GLLTAVGYNQ SRQQGRVRLF ETGLRFVPDI NAESGVRQQA MLGCVITGLQ
NDEHWAMESK TVDFFDLKGD LEAIIGLTVS ASEFSFRVAT HSALHPGQCA EILRNDRVIG
HIGAIHPSLE KPFGLNGKTI VFELELDALL HTSLPLAQAV SKFPANRRDI AVVVDESVSA
GDVMKLIRKV GENQLVGINL FDVYLGKGVE PGKKSLAIAL TLQDTTRTLE EKEIAETVES
VVSALKTEFN ASLRD