Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2215 |
Symbol | pheT |
ID | 4923036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2583594 |
End bp | 2585981 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163800 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001094340 |
Protein GI | 127513143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.188862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA GTGAGTCTTG GCTTCGTGAG TGGGTCAATC CAAGTATTAG CCGTGACGAT TTGTCACATC AGATCACCAT GGCGGGTCTG GAAGTCGACG GTGTCGACCC GGTAGCCGGT GATTTTTCAG GCGTTATCGT GGGTGAGGTG GTCGAATGCG GCCAGCACCC TGACGCCGAC AAGCTACGTG TCACTAAGAT TAATGTCGGT CAGGATGAGT TGATCGATAT CGTCTGCGGC GCACCAAACT GCCGTCTGGG CCTGAAAGTG GCCGTGGCTA TGGTGGGCGC GGTATTGCCG GGCGACTTTA AGATCAAGAA GGCCAAGCTA CGTGGTCAGC CATCATTTGG CATGCTCTGC TCCTATGGCG AGCTGGGTAT CGACATCGAG AGCGACGGCA TTATCGAGCT GCCGCTCGAT GCGCCTATCG GTCAAGACGT ACGTGAGTAC CTGGACCTTA ATGACGTGGT GATCGATGTC GATCTGACCG CTAACCGCGC CGACTGTCTT GGCATGGTGG GTCTGGCCCG CGAAGTGGGT GTACTTAACC GTCAAGCGGT TGTTGCCCCG ACATGGGAAG CGGTCACCCC TAGCATCGAA GATGCTATCG AGATCGACAA CCAGGCTCCT AGCGCCTGTC CACGCTACCT GGGTCGTGTG GTGAAAAACG TTAACGTTAA GGCGCAGTCG CCACTCTGGA TGCAGGAAAA ACTACGTCGC AGCGGCATTC GCTCTATCGA TCCTATCGTC GACATCACCA ACTATGTGTT GATCGAGTTC GGCCAGCCGA TGCACGCCTT CGACTTGGCG AAGATCGACG GCAAGATCCA GATCCGTCTG GGTGATGGTG AGGAGAAGCT GACTCTTCTC GATGGCAACG AAATTACCGT ACCAAACGAT ACCCTGGTTA TCGCCGATAA CAGCCAACCT CTGGCCTTGG CTGGTGTGTT TGGTGGCGAG TACTCGGGTG TGACCGGTGA GACCCAAGAT ATCCTGCTGG AGTGCGCCTT CTTTGCGCCG CTGGCGATCA TGGGTAAATC ACGTCGTCTT GGCCTGCACA CTGACTCGTC ACATCGCTTC GAGCGTGGCG TCGACCCTGA GCTACAACAT AAGGTGATCG ACCGTGCTAC GCGCCTGGTG CTAGAGATCT GTGGCGGCGA AGCCGGCCCT GTGGTTGAGT CTAAGGCCGA CGAGCATCTG CCTCAGCCTG CCAACATACT GCTGCGTCGC AGCAAGCTAG ATCGCGTGCT CGGCCATCAT ATTGCAGATG CCGATGTCAC CGAGATCCTT GAGCGTCTTG GTTTTGGCGT ATCACGTGTG GATGACAACT GGCAGGTTGT TACTGCGACT TACCGTTTCG ATATGGCGAT CGAAGAAGAT CTTATCGAAG AGGTTGCCCG CATCTATGGC TACAACAACA TTCCGAATGT TGCGCCAGTA GCGGCCCTAA GCATGCCTCT ACACAATGAG TCAGATATCG ACCTTAAGCG CGTACGCGCC ATGATGGTGG CCCGTGGCTT CCAGGAAGCC GTGACCTACA GCTTCGTCGA TCCTAAGCTG CAGCAACTGG TGCATCCGGG CAGCGATGCT ATGGTGCTGC CAAATCCTAT CTCGGTTGAG ATGTCGGCCA TGCGTTTGTC TATGTTCACC GGTCTGTTGA CTGCCGTGGG CTACAACCAG AGCCGCCAGC AAAACCGTGT TCGCCTGTTT GAAACCGGTC TGCGTTTCGT GCCAGATGCC AACGCCGAAT CGGGTGTGCG TCAGCAGGCT ATGCTAGGTG CCGTCATTGC CGGTAACCAA AATGACGAAC ATTGGTCGAT GGAATCAAAA ACTGTAGACT TTTTCGACCT TAAGGGCGAT CTGGAAGCCA TTATCGGCTT GACAGTTTCA GAGGATGAAT TTACTTTTAA AAAAGCATCT CATCCGGCGC TTCATCCGGG GCAATGTGCT GAAATCTTAA GAAATGATCG TGTGATTGGT GTCATTGGTG CCGTCCATCC GAGCCTGGAA AAGCCCTTCG GCTTAAATGG TAAAACCATC GTATTCGAGC TCGAATTAGA CGCCTTATTG CACGCAAGTT TGCCGCAAGC CCAGACTGTG TCTAAGTTTC CAGCAAACCG ACGTGACATT GCCATCCTGG TTGATGAAGA TGTCTCGGCA GGAAATGTTG TAAATTTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CTTAAACTTG TTCGATGTAT ACCAAGGTAA AGGTGTTGAA CCAGGTAAAA AGAGTCTGGC GATTGCACTT ACACTACAAG ACAACGCTCG TACACTTGAA GAGAAAGAAA TTGCTGAAAT GGTAGAAAAA GTAGTTTCTG AACTCAAGAC CGAGTTCAAC GCACTGTTGA GGGATTAA
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Protein sequence | MKFSESWLRE WVNPSISRDD LSHQITMAGL EVDGVDPVAG DFSGVIVGEV VECGQHPDAD KLRVTKINVG QDELIDIVCG APNCRLGLKV AVAMVGAVLP GDFKIKKAKL RGQPSFGMLC SYGELGIDIE SDGIIELPLD APIGQDVREY LDLNDVVIDV DLTANRADCL GMVGLAREVG VLNRQAVVAP TWEAVTPSIE DAIEIDNQAP SACPRYLGRV VKNVNVKAQS PLWMQEKLRR SGIRSIDPIV DITNYVLIEF GQPMHAFDLA KIDGKIQIRL GDGEEKLTLL DGNEITVPND TLVIADNSQP LALAGVFGGE YSGVTGETQD ILLECAFFAP LAIMGKSRRL GLHTDSSHRF ERGVDPELQH KVIDRATRLV LEICGGEAGP VVESKADEHL PQPANILLRR SKLDRVLGHH IADADVTEIL ERLGFGVSRV DDNWQVVTAT YRFDMAIEED LIEEVARIYG YNNIPNVAPV AALSMPLHNE SDIDLKRVRA MMVARGFQEA VTYSFVDPKL QQLVHPGSDA MVLPNPISVE MSAMRLSMFT GLLTAVGYNQ SRQQNRVRLF ETGLRFVPDA NAESGVRQQA MLGAVIAGNQ NDEHWSMESK TVDFFDLKGD LEAIIGLTVS EDEFTFKKAS HPALHPGQCA EILRNDRVIG VIGAVHPSLE KPFGLNGKTI VFELELDALL HASLPQAQTV SKFPANRRDI AILVDEDVSA GNVVNLIRKV GENQLVGLNL FDVYQGKGVE PGKKSLAIAL TLQDNARTLE EKEIAEMVEK VVSELKTEFN ALLRD
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