More than 300 homologs were found in PanDaTox collection
for query gene Caul_1188 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_3247  phenylalanyl-tRNA synthetase, beta subunit  51.15 
 
 
806 aa  769    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0036  phenylalanyl-tRNA synthetase subunit beta  50.3 
 
 
803 aa  726    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.393053  n/a   
 
 
-
 
NC_011666  Msil_1838  phenylalanyl-tRNA synthetase, beta subunit  53.2 
 
 
810 aa  753    Methylocella silvestris BL2  Bacteria  n/a    normal  0.0684561 
 
 
-
 
NC_009428  Rsph17025_2491  phenylalanyl-tRNA synthetase subunit beta  49.34 
 
 
805 aa  703    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR2123  phenylalanyl-tRNA synthetase subunit beta  49.58 
 
 
804 aa  701    Brucella suis 1330  Bacteria  normal  0.615312  n/a   
 
 
-
 
NC_009049  Rsph17029_0407  phenylalanyl-tRNA synthetase subunit beta  49.58 
 
 
805 aa  715    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.70562  normal 
 
 
-
 
NC_009505  BOV_2039  phenylalanyl-tRNA synthetase subunit beta  49.58 
 
 
804 aa  701    Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0209  phenylalanyl-tRNA synthetase subunit beta  47.59 
 
 
807 aa  702    Agrobacterium vitis S4  Bacteria  normal  0.212777  n/a   
 
 
-
 
NC_011757  Mchl_1912  phenylalanyl-tRNA synthetase, beta subunit  48.09 
 
 
850 aa  713    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.24608 
 
 
-
 
NC_008783  BARBAKC583_1312  phenylalanyl-tRNA synthetase subunit beta  46.71 
 
 
803 aa  664    Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0065  phenylalanyl-tRNA synthetase subunit beta  50.12 
 
 
812 aa  721    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.145265 
 
 
-
 
NC_010172  Mext_1630  phenylalanyl-tRNA synthetase, beta subunit  50.66 
 
 
807 aa  733    Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0126985 
 
 
-
 
NC_009511  Swit_2428  phenylalanyl-tRNA synthetase subunit beta  48.64 
 
 
792 aa  677    Sphingomonas wittichii RW1  Bacteria  normal  normal  0.153279 
 
 
-
 
NC_007493  RSP_1761  phenylalanyl-tRNA synthetase subunit beta  49.34 
 
 
805 aa  711    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5318  phenylalanyl-tRNA synthetase, beta subunit  51.74 
 
 
808 aa  735    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0273897 
 
 
-
 
NC_009636  Smed_3487  phenylalanyl-tRNA synthetase subunit beta  48.2 
 
 
808 aa  707    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0237  phenylalanyl-tRNA synthetase subunit beta  50.9 
 
 
798 aa  719    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0797  phenylalanyl-tRNA synthetase subunit beta  49.7 
 
 
804 aa  707    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3524  phenylalanyl-tRNA synthetase subunit beta  50 
 
 
800 aa  715    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0047  phenylalanyl-tRNA synthetase subunit beta  50.37 
 
 
802 aa  731    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0689  phenylalanyl-tRNA synthetase subunit beta  47.43 
 
 
796 aa  642    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.428867  n/a   
 
 
-
 
NC_010505  Mrad2831_3155  phenylalanyl-tRNA synthetase, beta subunit  51.81 
 
 
806 aa  757    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0454  phenylalanyl-tRNA synthetase subunit beta  50.48 
 
 
800 aa  722    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0444  phenylalanyl-tRNA synthetase subunit beta  51.28 
 
 
803 aa  733    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.341552  normal 
 
 
-
 
NC_011894  Mnod_5551  phenylalanyl-tRNA synthetase, beta subunit  52.83 
 
 
808 aa  748    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.325824  n/a   
 
 
-
 
NC_007958  RPD_0162  phenylalanyl-tRNA synthetase subunit beta  50.12 
 
 
824 aa  730    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.676244  normal 
 
 
-
 
NC_007964  Nham_0073  phenylalanyl-tRNA synthetase subunit beta  50.18 
 
 
817 aa  735    Nitrobacter hamburgensis X14  Bacteria  normal  0.252873  n/a   
 
 
-
 
NC_008043  TM1040_3623  phenylalanyl-tRNA synthetase subunit beta  48.73 
 
 
798 aa  713    Ruegeria sp. TM1040  Bacteria  normal  normal  0.117267 
 
 
-
 
NC_008254  Meso_0677  phenylalanyl-tRNA synthetase subunit beta  50.49 
 
 
801 aa  736    Chelativorans sp. BNC1  Bacteria  normal  0.443307  n/a   
 
 
-
 
NC_010338  Caul_1188  phenylalanyl-tRNA synthetase subunit beta  100 
 
 
812 aa  1619    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0221  phenylalanyl-tRNA synthetase, beta subunit  53.25 
 
 
812 aa  748    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1930  phenylalanyl-tRNA synthetase, beta subunit  50.97 
 
 
804 aa  715    Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0326717 
 
 
-
 
NC_010725  Mpop_1604  phenylalanyl-tRNA synthetase, beta subunit  50.06 
 
 
807 aa  728    Methylobacterium populi BJ001  Bacteria  normal  0.140835  normal  0.0323303 
 
 
-
 
NC_008347  Mmar10_0132  phenylalanyl-tRNA synthetase subunit beta  53.55 
 
 
799 aa  775    Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4536  phenylalanyl-tRNA synthetase subunit beta  47.23 
 
 
807 aa  704    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.140615 
 
 
-
 
NC_011369  Rleg2_4271  phenylalanyl-tRNA synthetase subunit beta  48.26 
 
 
810 aa  708    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0212  phenylalanyl-tRNA synthetase subunit beta  51.4 
 
 
802 aa  742    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2262  phenylalanyl-tRNA synthetase subunit beta  50.3 
 
 
795 aa  689    Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.283733 
 
 
-
 
NC_011365  Gdia_3094  phenylalanyl-tRNA synthetase subunit beta  44.96 
 
 
820 aa  619  1e-175  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.067961 
 
 
-
 
NC_002978  WD0425  phenylalanyl-tRNA synthetase subunit beta  41.14 
 
 
779 aa  560  1e-158  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0361  phenylalanyl-tRNA synthetase subunit beta  42.93 
 
 
827 aa  557  1e-157  Acidiphilium cryptum JF-5  Bacteria  normal  0.996315  n/a   
 
 
-
 
NC_008048  Sala_2783  phenylalanyl-tRNA synthetase subunit beta  45.27 
 
 
798 aa  552  1e-156  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007354  Ecaj_0587  phenylalanyl-tRNA synthetase subunit beta  35.75 
 
 
785 aa  479  1e-134  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0434  phenylalanyl-tRNA synthetase subunit beta  35.63 
 
 
788 aa  474  1e-132  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0432  phenylalanyl-tRNA synthetase subunit beta  38.52 
 
 
792 aa  469  1.0000000000000001e-131  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0368  phenylalanyl-tRNA synthetase beta subunit  36.6 
 
 
796 aa  469  1.0000000000000001e-131  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2592  phenylalanyl-tRNA synthetase, beta subunit  35.2 
 
 
794 aa  429  1e-119  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0126631 
 
 
-
 
NC_011901  Tgr7_1455  phenylalanyl-tRNA synthetase, beta subunit  36.09 
 
 
789 aa  432  1e-119  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.105434  n/a   
 
 
-
 
NC_007912  Sde_1582  phenylalanyl-tRNA synthetase subunit beta  35.05 
 
 
816 aa  426  1e-118  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0763  phenylalanyl-tRNA synthetase subunit beta  34.62 
 
 
797 aa  422  1e-117  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2800  phenylalanyl-tRNA synthetase subunit beta  36.75 
 
 
802 aa  419  1e-116  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2056  phenylalanyl-tRNA synthetase subunit beta  33.78 
 
 
790 aa  418  9.999999999999999e-116  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2638  phenylalanyl-tRNA synthetase subunit beta  32.72 
 
 
793 aa  410  1e-113  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1908  phenylalanyl-tRNA synthetase subunit beta  34.96 
 
 
795 aa  411  1e-113  Shewanella baltica OS195  Bacteria  hitchhiker  0.00255913  normal 
 
 
-
 
NC_012560  Avin_20470  phenylalanyl-tRNA synthetase subunit beta  34.58 
 
 
792 aa  411  1e-113  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1981  phenylalanyl-tRNA synthetase subunit beta  34.51 
 
 
792 aa  409  1e-113  Pseudomonas mendocina ymp  Bacteria  normal  0.134276  normal  0.20776 
 
 
-
 
NC_008609  Ppro_2303  phenylalanyl-tRNA synthetase subunit beta  34.61 
 
 
814 aa  411  1e-113  Pelobacter propionicus DSM 2379  Bacteria  normal  0.978211  n/a   
 
 
-
 
NC_009253  Dred_1620  phenylalanyl-tRNA synthetase subunit beta  33.02 
 
 
806 aa  408  1.0000000000000001e-112  Desulfotomaculum reducens MI-1  Bacteria  normal  0.263312  n/a   
 
 
-
 
NC_006368  lpp2765  phenylalanyl-tRNA synthetase subunit beta  32.84 
 
 
793 aa  407  1.0000000000000001e-112  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1662  phenylalanyl-tRNA synthetase, beta subunit  34.3 
 
 
793 aa  407  1.0000000000000001e-112  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2418  phenylalanyl-tRNA synthetase subunit beta  34.84 
 
 
795 aa  408  1.0000000000000001e-112  Shewanella baltica OS223  Bacteria  decreased coverage  0.000318266  hitchhiker  0.0000890505 
 
 
-
 
NC_009665  Shew185_1901  phenylalanyl-tRNA synthetase subunit beta  34.84 
 
 
795 aa  408  1.0000000000000001e-112  Shewanella baltica OS185  Bacteria  hitchhiker  0.00294003  n/a   
 
 
-
 
NC_010465  YPK_1825  phenylalanyl-tRNA synthetase subunit beta  34.1 
 
 
795 aa  409  1.0000000000000001e-112  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.713489  n/a   
 
 
-
 
NC_009708  YpsIP31758_1717  phenylalanyl-tRNA synthetase subunit beta  34.06 
 
 
795 aa  408  1.0000000000000001e-112  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00142202  n/a   
 
 
-
 
NC_010159  YpAngola_A2620  phenylalanyl-tRNA synthetase subunit beta  34.1 
 
 
795 aa  407  1.0000000000000001e-112  Yersinia pestis Angola  Bacteria  hitchhiker  0.00723547  normal 
 
 
-
 
NC_009052  Sbal_1874  phenylalanyl-tRNA synthetase subunit beta  34.84 
 
 
795 aa  409  1.0000000000000001e-112  Shewanella baltica OS155  Bacteria  decreased coverage  0.000755096  n/a   
 
 
-
 
NC_008700  Sama_1952  phenylalanyl-tRNA synthetase subunit beta  34.46 
 
 
795 aa  408  1.0000000000000001e-112  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1972  phenylalanyl-tRNA synthetase subunit beta  34.97 
 
 
793 aa  404  1e-111  Pseudomonas putida W619  Bacteria  normal  normal  0.025038 
 
 
-
 
NC_004347  SO_2086  phenylalanyl-tRNA synthetase subunit beta  34.43 
 
 
795 aa  404  1e-111  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2383  phenylalanyl-tRNA synthetase, beta subunit  34.55 
 
 
792 aa  405  1e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295144  n/a   
 
 
-
 
NC_007005  Psyr_2167  phenylalanyl-tRNA synthetase subunit beta  34.18 
 
 
792 aa  405  1e-111  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_2094  phenylalanyl-tRNA synthetase subunit beta  33.98 
 
 
792 aa  404  1e-111  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3220  phenylalanyl-tRNA synthetase subunit beta  34.54 
 
 
793 aa  404  1e-111  Pseudomonas putida F1  Bacteria  normal  normal  0.363224 
 
 
-
 
NC_010322  PputGB1_3476  phenylalanyl-tRNA synthetase subunit beta  34.66 
 
 
793 aa  405  1e-111  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00698698 
 
 
-
 
NC_007947  Mfla_1998  phenylalanyl-tRNA synthetase beta subunit  35.16 
 
 
784 aa  404  1e-111  Methylobacillus flagellatus KT  Bacteria  normal  0.109142  normal 
 
 
-
 
NC_009831  Ssed_2597  phenylalanyl-tRNA synthetase subunit beta  34.27 
 
 
795 aa  404  1e-111  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0200655  normal 
 
 
-
 
NC_010577  XfasM23_2015  phenylalanyl-tRNA synthetase subunit beta  33.86 
 
 
792 aa  401  9.999999999999999e-111  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2470  phenylalanyl-tRNA synthetase subunit beta  34.42 
 
 
793 aa  400  9.999999999999999e-111  Pseudomonas putida KT2440  Bacteria  normal  0.24212  normal 
 
 
-
 
NC_009483  Gura_2623  phenylalanyl-tRNA synthetase subunit beta  32.52 
 
 
801 aa  400  9.999999999999999e-111  Geobacter uraniireducens Rf4  Bacteria  normal  0.417959  n/a   
 
 
-
 
NC_009438  Sputcn32_1829  phenylalanyl-tRNA synthetase subunit beta  34.88 
 
 
795 aa  400  9.999999999999999e-111  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.00000186413  n/a   
 
 
-
 
NC_007614  Nmul_A0492  phenylalanyl-tRNA synthetase subunit beta  33.45 
 
 
792 aa  402  9.999999999999999e-111  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.229173  n/a   
 
 
-
 
NC_008321  Shewmr4_1809  phenylalanyl-tRNA synthetase subunit beta  34.27 
 
 
795 aa  402  9.999999999999999e-111  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2168  phenylalanyl-tRNA synthetase subunit beta  34.27 
 
 
795 aa  402  9.999999999999999e-111  Shewanella sp. MR-7  Bacteria  normal  0.0570245  normal 
 
 
-
 
NC_008577  Shewana3_1864  phenylalanyl-tRNA synthetase subunit beta  34.27 
 
 
795 aa  401  9.999999999999999e-111  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1404  phenylalanyl-tRNA synthetase, beta subunit  33.98 
 
 
795 aa  401  9.999999999999999e-111  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2063  phenylalanyl-tRNA synthetase subunit beta  33.76 
 
 
817 aa  396  1e-109  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0478558  normal 
 
 
-
 
NC_011899  Hore_05640  phenylalanyl-tRNA synthetase, beta subunit  32.37 
 
 
799 aa  395  1e-108  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003705  phenylalanyl-tRNA synthetase beta chain  33.01 
 
 
801 aa  393  1e-108  Vibrio sp. Ex25  Bacteria  normal  0.374236  n/a   
 
 
-
 
NC_007492  Pfl01_1936  phenylalanyl-tRNA synthetase subunit beta  33.94 
 
 
792 aa  395  1e-108  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0927196  normal 
 
 
-
 
NC_013421  Pecwa_2185  phenylalanyl-tRNA synthetase subunit beta  34.39 
 
 
795 aa  394  1e-108  Pectobacterium wasabiae WPP163  Bacteria  normal  0.861692  n/a   
 
 
-
 
NC_012917  PC1_1893  phenylalanyl-tRNA synthetase subunit beta  34.63 
 
 
795 aa  394  1e-108  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02093  phenylalanyl-tRNA synthetase subunit beta  32.61 
 
 
806 aa  393  1e-108  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1709  phenylalanyl-tRNA synthetase subunit beta  33.21 
 
 
795 aa  394  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.739174  n/a   
 
 
-
 
NC_010814  Glov_1874  phenylalanyl-tRNA synthetase subunit beta  33.93 
 
 
801 aa  394  1e-108  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00584126  n/a   
 
 
-
 
NC_009457  VC0395_A0844  phenylalanyl-tRNA synthetase subunit beta  33.89 
 
 
795 aa  394  1e-108  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000714216  n/a   
 
 
-
 
NC_011080  SNSL254_A1449  phenylalanyl-tRNA synthetase subunit beta  33.57 
 
 
795 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1466  phenylalanyl-tRNA synthetase subunit beta  33.69 
 
 
795 aa  391  1e-107  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I1732  phenylalanyl-tRNA synthetase subunit beta  33.05 
 
 
795 aa  391  1e-107  Aliivibrio salmonicida LFI1238  Bacteria  hitchhiker  0.00878056  n/a   
 
 
-
 
NC_007954  Sden_1603  phenylalanyl-tRNA synthetase subunit beta  32.97 
 
 
795 aa  392  1e-107  Shewanella denitrificans OS217  Bacteria  normal  0.643795  n/a   
 
 
-
 
NC_011149  SeAg_B1835  phenylalanyl-tRNA synthetase subunit beta  33.69 
 
 
795 aa  391  1e-107  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000347523  n/a   
 
 
-
 
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