| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1603 |
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| Symbol | pheT |
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| ID | 4018078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1866191 |
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| End bp | 1868578 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955613 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_562610 |
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| Protein GI | 91792959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.643795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA GTGAATCTTG GCTTCGTGAG TGGGTCAATC CTGCAATAAG CCGTGACGAA
TTATCACACC AAATTACCAT GGCTGGCCTC GAAGTCGATG GCGTCGATCC CGTCGCTGCA
GCATTCAGCG GCGTTATCAT AGGTGAAGTG GTTGAATGTG GTCAGCACCC TGATGCGGAC
AAACTTCAAG TTACCAAAAT CAATGTTGGC AGTGATGAGC TTATCGACAT AGTGTGTGGT
GCACCTAATT GCCGTTTAGG CCTTAAAGTG GCCGTTGCCA TGGTGGGCGC GGTATTGCCT
GGCGATTTTA AAATCAAAAA AGCCAAGCTA CGCGGTCAGC CGTCTATGGG CATGTTGTGT
TCATTTACAG AGCTTGGCAT CGACATCGAA AGCGATGGCA TTATTGAATT ACCCCAAGAT
GCGCCACTTG GCGTCAGCGT GCGTGAATTC TTAGATCTTG ATGATGCCAT CATAGATGTA
GATTTAACCG CTAACCGCGC CGATTGCTTA GGCATGGTGG GCCTTGCCCG TGAAGTGGGT
GTGTTAAATC GTCAAAGCGT GACCGCCCCA AGCTGGGAAG CGGTGAGCGC CAGCATAGAT
GCGCCGTTTA GCATTGAAGT GAAAACCCCT GAGCTTTGCC CGCGTTATTT AGGCCGTGTG
GTCAAAAATA TCAATGTAGC AGCGCCAACG CCTAGCTGGA TGCAAGAGAA ATTGCGTCGC
AGTGGTATAC GCTCAATCGA TGCCATCGTC GATATCACCA ATTTTGTGTT GATTGAATTT
GGTCAACCTA TGCATGCCTT CGATTTAAAC ACCTTAAATG GCGGCATTAC AGTGCGTTTA
GCCGATGGTG TTGAGAAGCT CAAGCTGTTG GATGGTAACG AAATCACAGT GCCAAATGAC
ACCTTAGTGA TTGCCGATGA TAACCAAGCT GTTGCTCTGG CGGGCGTATT TGGCGGTGAA
GCCACAGGGG TGAGCGACAC CACCCAAGAC ATCTTGTTAG AGTGTGCCTT CTTCTCACCC
CTTGCCATCA TGGGTAAATC TCGCCGCTTA GGCTTACACA CAGACGCGTC ACACAGGTTT
GAACGTGGCG TCGACCCAGA GCTTCAACAC AAGGTGATGG ACAGGGCGAC TCGTCTGGTA
TTAGACATTT GTGGCGGTGA AGCCGGTCAA GTGATTGAAG CGGTATCTGC TGAATATTTG
CCTAAGCCTG CACAGCTGAC GTTACGTCGC AGTAAGCTTG ATAACACCTT AGGGCATCAT
ATTCCTGATA CCGATGTGGT GGAGATTTTA GAACGCTTAG GCTTTAGTGT CAGTGCCAAT
GGTGACACTT GGCGCGTGAC AACCGCGACT TATCGTTTCG ATATGGCTAT CGAAGAAGAT
TTAATCGAAG AAGTCGCCCG CATTTACGGT TATGACAATA TCCCCAATAT TGCACCACAA
GCCGCACTTA AGATGTCTGA TCATAAAGAA GCTGACATCG ATCTTAAGCG CGTACGCAGC
TTGTTAGTGG CCCGTGGTTT CCAAGAAGCG GTGACTTACA GCTTTGTTGA TCCCAAAATG
CAAAATTTAG TGCACCCAGG CCTTGAGGCT ATGGTGTTGC CTAACCCAAT TTCCATTGAA
ATGTCGGCAA TGCGTTTGTC TATGTTCACC GGTCTTTTGG GCGCCGTGGG TTATAACCAG
AGCCGTCAAC AGGGCAGAGT GCGTTTATTT GAGACGGGTT TGCGTTTTAT TCCTGATGCT
ACTGCAGAAG CGGGTGTTAG GCAGCAAGCC ATGATTGGCG CTGTGATCTC TGGGGTTCAA
AACGACGAAC ATTGGTCGAT GGAATCCAAG ACAGTTGATT TTTTTGACTT AAAAGGTGAT
TTAGAGGCCA TGATTGGCTT GACAGTTGCC GCTTCTGAAT TTAGTTTTAA AGGAGCAACG
CATTCTGCTA TGCATCCTGG GCAATGTGCT GAAATATTAA GAAATAATCG AGTTATCGGC
TATATTGGTG CTATACATCC AAGTTTAGAA AAGCCTTTTG GCTTAAACGG TAAAACCTTT
GTTTTTGAGC TCGAATTAGA CGCATTATTA CAGTCTAATT TGCCGCTAGC CCAGACTGTA
TCTAAGTTTC CTGCAAATCG TCGTGACATA GCTGTCGTAG TCGATGAGAG CATAGCAGCA
AGCGATGTGA TGAATTTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CTTAAACTTA
TTCGATGTAT ACACAGGTAA AGGTGTTGAA CTTGGCAAGA AGAGCCTAGC GATAGCACTT
ACACTACAAG ACACTACTCG TACACTTGAA GAAAAAGACA TTACTGAAAC AGTTGATTCA
GTAGTTTCTG CACTTAAGAC CGAGTTCAAC GCATTGTTGA GGGATTAA
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| Protein sequence | MKFSESWLRE WVNPAISRDE LSHQITMAGL EVDGVDPVAA AFSGVIIGEV VECGQHPDAD
KLQVTKINVG SDELIDIVCG APNCRLGLKV AVAMVGAVLP GDFKIKKAKL RGQPSMGMLC
SFTELGIDIE SDGIIELPQD APLGVSVREF LDLDDAIIDV DLTANRADCL GMVGLAREVG
VLNRQSVTAP SWEAVSASID APFSIEVKTP ELCPRYLGRV VKNINVAAPT PSWMQEKLRR
SGIRSIDAIV DITNFVLIEF GQPMHAFDLN TLNGGITVRL ADGVEKLKLL DGNEITVPND
TLVIADDNQA VALAGVFGGE ATGVSDTTQD ILLECAFFSP LAIMGKSRRL GLHTDASHRF
ERGVDPELQH KVMDRATRLV LDICGGEAGQ VIEAVSAEYL PKPAQLTLRR SKLDNTLGHH
IPDTDVVEIL ERLGFSVSAN GDTWRVTTAT YRFDMAIEED LIEEVARIYG YDNIPNIAPQ
AALKMSDHKE ADIDLKRVRS LLVARGFQEA VTYSFVDPKM QNLVHPGLEA MVLPNPISIE
MSAMRLSMFT GLLGAVGYNQ SRQQGRVRLF ETGLRFIPDA TAEAGVRQQA MIGAVISGVQ
NDEHWSMESK TVDFFDLKGD LEAMIGLTVA ASEFSFKGAT HSAMHPGQCA EILRNNRVIG
YIGAIHPSLE KPFGLNGKTF VFELELDALL QSNLPLAQTV SKFPANRRDI AVVVDESIAA
SDVMNLIRKV GENQLVGLNL FDVYTGKGVE LGKKSLAIAL TLQDTTRTLE EKDITETVDS
VVSALKTEFN ALLRD
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