Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1864 |
Symbol | pheT |
ID | 4477923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2208269 |
End bp | 2210656 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726446 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_869501 |
Protein GI | 117920309 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA GCGAATCTTG GCTTCGTGAG TGGGTCAATC CTGCCGTTAG CCGTGAAGCA TTATCCCACC AGATCACTAT GGCTGGCCTC GAAGTCGATG GCGTTGATGC CGTGGCTGCC GAGTTCAGCG GCGTTGTGAT TGGTGAAGTG GTCGAATGTG GCCAGCACCC AGATGCAGAC AAACTGCGCG TGACTAAAGT CAGTGTCGGC AGTGGTGAAC TTATCGATAT CGTCTGTGGC GCACCAAACT GCCGCCAAGG CCTGCGCGTT GCCGTTGCCA TGGTTGGCGC TGTATTGCCA GGCGATTTTA AAATTAAAAA GGCTAAGCTG CGTGGTATGC CTTCAGAAGG TATGCTGTGT TCATACAGCG AGCTGGGTAT CGACATCGAC AGCGATGGCA TTATCGAACT GCCATTAGAT GCGCCATTAG GCACGGATTT ACGTGAGTAT CTCCAGCTTG ATGACGCTGT GATTGAAGTG GATTTAACCG CTAACCGTGC CGACTGTTTA GGCATGGTGG GTCTGGCCCG TGAAGTAGGC GTGTTAAACC GTGCTGCTGT GACTGAGCCA CAATGGCAAG CCGTTACGCC AACGATTGAT GCCAAAGTGG CTATCAATGT GAAGGAAAGC GCAGCGTGCC CACGCTACTT AGGTCGTGTG GTGAAGAATG TAAACGTGAA AGCTGCTACG CCATTATGGA TGCAGGAAAA ACTGCGCCGC AGCGGTATCC GTTCTATCGA TCCTATCGTC GATATCACTA ACTTCGTGTT AGTTGAATTC GGCCAACCTA TGCACGCCTT CGACCTTGCC AAGCTGACTG GCGACATCCA AGTGCGTTTG GGGAATGGCG AAGAGAAAAT CACTCTGCTC GATGGCAGCG AAGTGACCAT TCCAAGCGAT ACCTTAGTGA TTGCCGACAA TGTTTGCCCA TTAGCGCTTG CTGGCGTATT TGGCGGCGAA TACTCGGGTG TGAGTGACAC CACGCAAGAC ATTCTGCTGG AATGTGCCTT CTTCGCACCG TTAGCTATTA TGGGTAAATC ACGCCGTTTA GGTCTGCATA CCGATTCATC ACACCGTTTT GAACGTGGTG TTGACCCTGA GATGCAGCAC AAGGTTATGG ACCGTGCGAC TCGCTTAGTG CTTGATATTT GCGGTGGTGA AGCGGGTCCT GTGGTTGAAG CGAAATCTGA CGCTGACTTA CCAAAGCCTG CGCAAATCCT ATTGCGTCGC AGCAAGTTAG ATAAAATTTT GGGTCACCAT GTTCCCGATA GCGACGTGGT TGAAATCCTT GAACGTTTAG GTTTTGGAGT AGTTGCAGGC GAGGGTAGCT GGCAGGTCAC AACCGCCACT TACCGCTTCG ATATGGCGAT TGAAGAAGAC TTAATCGAAG AAGTGGCCCG TATCTACGGT TACAACAACA TTCCAAACGT TGCGCCTGTG GCGTCACTGC GGATGTCAGA CCATAAAGAA ACCGATTTAA GCCTCAAGCG CGTACGTTCG CTGTTAGTGG CCCGTGGTTT CCAAGAAGCC GTGACTTACA GTTTCGTCGA TCCTAAGCTG CAAAATCTGG TTCACCCAGG CGAGCAAGCC ATGGTGTTGC CGAACCCAAT TTCTAGCGAA ATGTCGGCCA TGCGTTTGTC GATGTTCACA GGATTATTGA CTGCGGTTGG CTACAACCAA AGTCGTCAAC AGGGTCGTGT GAGACTTTTT GAAACTGGCC TGCGCTTTGT TCCTGATATT AATGCAGAAT CAGGTGTAAG ACAGCAAGCT ATGCTCGGTT GCATCATAAC TGGCCTCCAA AATGACGAAC ATTGGGCTAT GGAATCGAAA ACTGTTGATT TTTTCGACCT TAAAGGCGAT TTAGAAGCAA TTATCGGCTT GACAGTTTCC GCATCAGAAT TTAGCTTTAG AGTAGCGACG CATTCTGCTC TTCATCCAGG GCAATGTGCT GAAATATTGA GAAATGATCG AGTGATCGGT CATATAGGTG CTATCCATCC TAGTTTGGAG AAGCCTTTTG GACTCAATGG TAAAACCATC GTTTTTGAGT TGGAATTGGA TGCTTTATTG CATACCAGTT TACCGCTAGC CCAAGCTGTA TCTAAGTTCC CGGCTAATCG TCGTGACATC GCAGTAGTCG TAGATGAAAG TGTATCTGCA GGCGATGTAA TGAAATTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG TTCGATGTAT ACTTAGGTAA AGGTGTTGAG CCCGGCAAGA AGAGCTTGGC GATAGCACTT ACATTACAAG ACACTACTCG TACACTTGAG GAAAAAGAGA TCGCTGAGAC AGTAGAATCA GTTGTTTCTG CCCTGAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
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Protein sequence | MKFSESWLRE WVNPAVSREA LSHQITMAGL EVDGVDAVAA EFSGVVIGEV VECGQHPDAD KLRVTKVSVG SGELIDIVCG APNCRQGLRV AVAMVGAVLP GDFKIKKAKL RGMPSEGMLC SYSELGIDID SDGIIELPLD APLGTDLREY LQLDDAVIEV DLTANRADCL GMVGLAREVG VLNRAAVTEP QWQAVTPTID AKVAINVKES AACPRYLGRV VKNVNVKAAT PLWMQEKLRR SGIRSIDPIV DITNFVLVEF GQPMHAFDLA KLTGDIQVRL GNGEEKITLL DGSEVTIPSD TLVIADNVCP LALAGVFGGE YSGVSDTTQD ILLECAFFAP LAIMGKSRRL GLHTDSSHRF ERGVDPEMQH KVMDRATRLV LDICGGEAGP VVEAKSDADL PKPAQILLRR SKLDKILGHH VPDSDVVEIL ERLGFGVVAG EGSWQVTTAT YRFDMAIEED LIEEVARIYG YNNIPNVAPV ASLRMSDHKE TDLSLKRVRS LLVARGFQEA VTYSFVDPKL QNLVHPGEQA MVLPNPISSE MSAMRLSMFT GLLTAVGYNQ SRQQGRVRLF ETGLRFVPDI NAESGVRQQA MLGCIITGLQ NDEHWAMESK TVDFFDLKGD LEAIIGLTVS ASEFSFRVAT HSALHPGQCA EILRNDRVIG HIGAIHPSLE KPFGLNGKTI VFELELDALL HTSLPLAQAV SKFPANRRDI AVVVDESVSA GDVMKLIRKV GENQLVGINL FDVYLGKGVE PGKKSLAIAL TLQDTTRTLE EKEIAETVES VVSALKTEFN ASLRD
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