| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0221 |
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| Symbol | |
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| ID | 5454117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 239036 |
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| End bp | 241474 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875783 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001411501 |
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| Protein GI | 154250677 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTCA CACTGTCCTG GCTGAAACAG CCGCTCGAAA CGGAAGCAAC GCTCGACGAG
ATCGTCGAAC GCCTGACCAT GCTCGGCCTC GAGGTCGAAG GCGTCGAAGA CCCGGCGAAG
AAACTCGGCG TCTTCACCGT CGCCAAGGTG CTGGAAGCAA AGCCGCATCC CGACGCCGAC
AAGCTGCAGG TGCTGAAGGT CGAAGCACTG GTCGAAGGCG AAGTGAAGCA GTTGCAGGTG
GTCTGCGGCG CGCCGAACGC GCGCGCGGGA CTGACCGGTG TGTTTGCACC GCCCGGCGCG
ACTATCCCAG CCAACGGCAT GGTGCTGAAG CCGACGAAAA TCCGCGGCGT CGAATCGAAC
GGCATGATGT GTTCGGAGCG CGAGCTTGAA CTCTCCGACG AGCATGAGGG CATCATCGAC
CTGAAAGGCG ACTGGAAGGT CGGCACGCCG GCGGCTGAAG TTTTGGGCCG CAATGATCCC
GTCATCGAAA TCGCGATCAC GCCGAACCGC CCGGATTGCC TAGGCGTCTA CGGTGTCGCA
CGCGATCTCG CGGCGGCGGG CCTCGGACGT TTGCGTGAGG GCAATTTCCC GCCGGTGCAG
GGCAAGTTCG AAAGCCCCAT CGGCATCAAG CTGGAATTCC CGTCGGGTGC TGAAAACGCC
TGCCCGGTTT TCGCCGGACG CCTGATTCGC GGCGTCAAGA ACGGGCCATC GCCGGACTGG
CTGCAGAACT GGTTGAAGGC TGTCGGCCTG CGCCCGATCA ATGCGCTGGT CGACATAACG
AACTTCATTT CGCTCGATCG CGGCCGTCCC TTGCATGTTT ACGACGCATC GAAACTGACC
GGCGATATCC GTGCGCGGCT CGGCCGCGAA GGCGAGAAGC TTGTTGCGCT CGACGGCAAG
ACCTACGACG TGAAGCCGGA CTATTGCGTC ATCGCAGACG ACGCGCGCGT GCTCGGCCTT
GCGGGCGTGA TGGGTGGCGA GGAAAGCGGC TCGACGGCGG AGACGGTGGA CGTTTTCATC
GAGAGCGCGT ATTTCGATCC CTATCGCACG GCGCGGACAG GCCGCGACAC AGGCATCATC
TCCGATGCGC GCTACCGCTT CGAGCGCGGC GTCGACCCGC AATTCGTGCG TCCGGGCCTC
GAACTCGCGA CGAAGATGAT CCTCGAATTC TGCGGCGGCG AGCCGTCGAA CATCGTTGTG
GCGGGCGAGG AGCCGGATAC GTCGAAGACA ATCGACTTCG ATCCCGCGCG TATCGAGAAA
CTGACGGGCC TTTCGCTGCC GCAATCGGAA ACGATGCGCA TTCTCTCCGC GCTCGGCTTC
AAGGTTCTCG AAGAGGGAAG CCGGAAGCTT TCGGTGTCGG TCCCGTCATG GCGCCCGGAT
ATCGACGGGC AGGCCGATCT CGTGGAAGAA GTCGTGCGCG TGCACGGCCT CAACGAAGTG
AAATCGGTCG CCCTGCCACG GCTTCATGCG GTGGCAAAGC CGGTGCTCTC ATCGCGCCAG
CGCCGCGAAC GCATGGCGCG CCGGGCACTC GCCGCGCGTG GGCTGGTCGA GGCGGTGACC
TGGTCGTTCA TTCCGGAACG CGATGCGGTT CTCTTCGGCG GCGGCAATGC GGCGCCGTTG
CTGAAACTCG CCAATCCGAT TTCCGCCGAT ATGAGCCATA TGCGGCCGAG CCTTCTCGCG
GGTCTCATTG CCGCAGCGGG CCGCAACATG GCGCGCGGTT TCCCGGACGT GGGGATGTTC
GAGGTCGGGC AGCAATTCGA GAGTGACGAG CCTTCGGGCC AAGTGCTGGC GGCAAGCGGC
ATAAGGCGCG GTACGGCGCG GCCGCAAGGC GCGGGCCGCC ACTGGCAGGG CAAGAGCGGG
CCCGCCGAGG CGATGGACGC GAAGGCGGAT GCCGTCGCGC TGCTCGCGGC GCTCGGCGCG
CCGGTCGCGA ACTTCCAGAT CGGCGCCGAC GCACCCGCCT GGTATCACCC GGGCCGTTCG
GGCGTCTTCC GTCTCGGGCC GAAGAACGTC ATCGGCTATT TCGGCGAGCT GCATCCACGC
GTGCTGGACG ATATGGACGT GGCAGGCCCG ATTGTCGGTT TCGAGATTTT CCCGGATGCG
ATCCCCGAAC CGAAACGGAA ACCGACGCGG GCAAAACCGC CACTGGAGCT TTCCGATCTT
CAGCCGGTGC GGCGCGATTT TGCCTTCGTC GTCTCGGAGG GCGTGACGGC GGACCAGCTT
CTGCGTGCGG CGAAAGGTGC GGACAAGAAA CTCATCACGG ACGTCTCGCT CTTCGACGTC
TTCGAAGGCG GCTCGCTTGG CGAGGGACAG AAGTCGCTCG CCATCGAAGT GACGCTGCAG
CCGGTCGAGA AGACGCTGAC GGACGAGGAA ATCGACGCCG TGTCGAAACG CATCGTCGTG
GCGGTGGAGA AAGCGACCGG AGGCGCGTTG CGCGGCTAA
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| Protein sequence | MKFTLSWLKQ PLETEATLDE IVERLTMLGL EVEGVEDPAK KLGVFTVAKV LEAKPHPDAD
KLQVLKVEAL VEGEVKQLQV VCGAPNARAG LTGVFAPPGA TIPANGMVLK PTKIRGVESN
GMMCSERELE LSDEHEGIID LKGDWKVGTP AAEVLGRNDP VIEIAITPNR PDCLGVYGVA
RDLAAAGLGR LREGNFPPVQ GKFESPIGIK LEFPSGAENA CPVFAGRLIR GVKNGPSPDW
LQNWLKAVGL RPINALVDIT NFISLDRGRP LHVYDASKLT GDIRARLGRE GEKLVALDGK
TYDVKPDYCV IADDARVLGL AGVMGGEESG STAETVDVFI ESAYFDPYRT ARTGRDTGII
SDARYRFERG VDPQFVRPGL ELATKMILEF CGGEPSNIVV AGEEPDTSKT IDFDPARIEK
LTGLSLPQSE TMRILSALGF KVLEEGSRKL SVSVPSWRPD IDGQADLVEE VVRVHGLNEV
KSVALPRLHA VAKPVLSSRQ RRERMARRAL AARGLVEAVT WSFIPERDAV LFGGGNAAPL
LKLANPISAD MSHMRPSLLA GLIAAAGRNM ARGFPDVGMF EVGQQFESDE PSGQVLAASG
IRRGTARPQG AGRHWQGKSG PAEAMDAKAD AVALLAALGA PVANFQIGAD APAWYHPGRS
GVFRLGPKNV IGYFGELHPR VLDDMDVAGP IVGFEIFPDA IPEPKRKPTR AKPPLELSDL
QPVRRDFAFV VSEGVTADQL LRAAKGADKK LITDVSLFDV FEGGSLGEGQ KSLAIEVTLQ
PVEKTLTDEE IDAVSKRIVV AVEKATGGAL RG
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