15 homologs were found in PanDaTox collection
for query gene Bcav_1123 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012669  Bcav_1123  transcriptional activator ligand binding domain protein  100 
 
 		 177 aa  348  3e-95  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6627  transcriptional activator ligand binding domain protein  36.72 
 
 		 164 aa  124  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.787104  normal  0.146802 
 
 
-
 
NC_013510  Tcur_0263  transcription activator, effector binding protein  37.64 
 
 		 166 aa  119  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_1132  transcription activator, effector binding  38.15 
 
 		 164 aa  119  3e-26  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_1653  transcriptional activator ligand binding domain protein  40.91 
 
 		 173 aa  114  1.0000000000000001e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0385055  normal  0.0308654 
 
 
-
 
NC_013132  Cpin_4913  transcriptional activator ligand binding domain protein  33.33 
 
 		 164 aa  95.9  3e-19  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00232908  normal  0.22679 
 
 
-
 
NC_013169  Ksed_20280  transcriptional regulator, effector-binding domain/component  32.2 
 
 		 167 aa  85.5  3e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0307549  normal  0.329792 
 
 
-
 
NC_013131  Caci_2813  hypothetical protein  40.51 
 
 		 111 aa  64.3  0.0000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.239957  normal  0.0833184 
 
 
-
 
NC_008541  Arth_0754  transcription activator, effector binding  30.23 
 
 		 156 aa  52.4  0.000004  Arthrobacter sp. FB24  Bacteria  normal  0.287281  n/a   
 
 
-
 
NC_014230  CA2559_07010  hypothetical protein  23.21 
 
 		 343 aa  48.9  0.00004  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_6884  transcriptional regulator, AraC family  30.57 
 
 		 301 aa  48.1  0.00006  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2087  transcription activator effector binding  31.03 
 
 		 166 aa  47.4  0.0001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000102768 
 
 
-
 
NC_008346  Swol_1364  hypothetical protein  23.3 
 
 		 152 aa  45.1  0.0005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.33275  n/a   
 
 
-
 
NC_011832  Mpal_1231  transcription activator effector binding  29.1 
 
 		 155 aa  42  0.004  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  0.0816033 
 
 
-
 
NC_013440  Hoch_2214  transcriptional activator ligand binding domain protein  32.24 
 
 		 210 aa  42  0.005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.307481  normal  0.371698 
 
 
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