| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2214 |
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| Symbol | |
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| ID | 8544600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3076040 |
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| End bp | 3076672 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646386921 |
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| Product | transcriptional activator ligand binding domain protein |
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| Protein accession | YP_003266652 |
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| Protein GI | 262195443 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.307481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.371698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCATCGA CCCGCCCAAT CATCGCCATC ACCACGCTGC TCGCCGCCGC CATCGCCGCG
CTGCTCGCCG CCGCGGCGCT GCCCGCGCCG GTCCGCGCCG AGCCCCCGGC CCAGCGCCCG
AGCAAGCCCG CCGCCGCCGA GCCCGCCGCC GCCGCCGACG CGGCCAAGCC GCGCATCTCG
TCGCGCACCC TGGCGGCCCA GCACACCCTG ATCATCCGCG GCAGCGCCGC GCCCGTCGAA
CTTGGCGAGC AGATGAGCGC GCTCATCCCG CGCCTCATCG GCTTCGCCAT GATGCAGCGC
CTCGACATGA GCGGGCCGCC CTTTGCGCGC TACCGTCACT ACAGCGAGGA GCGCATCGAC
TTCGAGGTCG GCGTGCCCAT CGCCGCGGCT CACCCGGGCA GCGCCTCCTG GAACATCGAG
CCCGGCACGC TGCCCGCCGG CCCGGCGCTC ACCGCCGTGC ACCGCGGCTC CTACGACGAT
CTGCCCGACA CCCACGCCGC CCTGCGCCGG GCCGCGCGCG CCCGCGGCAA GCGCGCCGAC
GGCCCGCTGT GGGAGGTCTT CGTGACCAAC CCGGCCACCC AGCCCGACCC GGCCAAGCTG
CGCACCGAAG TGTACCTGTC GCTCGCGCCC TGA
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| Protein sequence | MPSTRPIIAI TTLLAAAIAA LLAAAALPAP VRAEPPAQRP SKPAAAEPAA AADAAKPRIS
SRTLAAQHTL IIRGSAAPVE LGEQMSALIP RLIGFAMMQR LDMSGPPFAR YRHYSEERID
FEVGVPIAAA HPGSASWNIE PGTLPAGPAL TAVHRGSYDD LPDTHAALRR AARARGKRAD
GPLWEVFVTN PATQPDPAKL RTEVYLSLAP
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