| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1231 |
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| Symbol | |
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| ID | 7271509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1263777 |
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| End bp | 1264244 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569868 |
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| Product | transcription activator effector binding |
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| Protein accession | YP_002466292 |
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| Protein GI | 219851860 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0816033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAGA TACAGATCAT CGAAGTTCTG CCTCAACTGG TACTTGGTAT GCGGCAAAAA
GGGGCTTATC GTGATATTCC GGCGATGCTC GGCGAGCTCT ATATCTATGG GATCTCTCAT
CAATCAGTCC TGACCGGACC GCCGGTCTTC ATCTGCCACG AAGGATCGGT CGAGGAGGCT
ATGGTCGCCA ACGAGACCGG GGATGCCGAT ATGGAGGTTG CTTTTCCGAT AGAAGGATCG
ATAGAGGGTG AAGGGCCTAT ATCGATCTAT GAACTTCCAG GTGGGAGGAT GGCGAAGGTG
CTGCACCGGG GGCCCTATGA GGATTGCGGG CCGACCTATA CCCGGCTCTT CGCCTGGATA
GAGGAGCAGG GGCTTGCCGT CACCGGCCCG GTTCGCGAGG TCTACCTGAA CGATCCGACC
CTGGTGAAGC CAGAGGAGTT GATGACCGAG ATTCATGTCC CGATTTAA
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| Protein sequence | MEEIQIIEVL PQLVLGMRQK GAYRDIPAML GELYIYGISH QSVLTGPPVF ICHEGSVEEA
MVANETGDAD MEVAFPIEGS IEGEGPISIY ELPGGRMAKV LHRGPYEDCG PTYTRLFAWI
EEQGLAVTGP VREVYLNDPT LVKPEELMTE IHVPI
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