| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4913 |
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| Symbol | |
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| ID | 8361089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6140182 |
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| End bp | 6140676 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644967062 |
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| Product | transcriptional activator ligand binding domain protein |
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| Protein accession | YP_003124547 |
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| Protein GI | 256423894 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00232908 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.22679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGTG ATCCAAAAAT AGCACACCAC CCTGAGCAGC CATATGTAGC GATTCGTAAA
AGAGTGAAGA TGGCCGACAT TCCAGTCATC CTGCCGCCCC TGATACCGCA GATCGTTCAG
TGGATGGAAC AGCATGGTAT TGCTCAGGCA GGCCCCGTAT TTTTTCGTTA TCTGCAATTC
GACCATGAAG ATCAGTTGCT CGTGGATGTA GGCGTACCGA CACAGGGGCC TGTGAAGGTT
AGCGGAGACG TGGTTGCCGG TTCGTTTCCT GCTGCGAATT ATGTGACGGT GACGTATATG
GGAGATTATA GCAACCTCAA AGAGGTGCAT ATGGGTCTGG AAGCCTGGAT GAAAGAGAAG
GGATTGAAGG AAGGCGGGCA GAAAGTAGAA GGGGCGGAAT ATGCTGCCCG GACAGAGTTT
TATCTGACCG ATCCGGATGA GGTGGAAGAT CCGAAGGACT GGCGGACGGA TGTAGTGATA
TTACTGGCGG GCTAA
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| Protein sequence | MTSDPKIAHH PEQPYVAIRK RVKMADIPVI LPPLIPQIVQ WMEQHGIAQA GPVFFRYLQF
DHEDQLLVDV GVPTQGPVKV SGDVVAGSFP AANYVTVTYM GDYSNLKEVH MGLEAWMKEK
GLKEGGQKVE GAEYAARTEF YLTDPDEVED PKDWRTDVVI LLAG
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