Gene Ksed_20280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20280 
Symbol 
ID8373532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2108572 
End bp2109075 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID644992278 
Producttranscriptional regulator, effector-binding domain/component 
Protein accessionYP_003149788 
Protein GI256825828 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4978] Transcriptional regulator, effector-binding domain/component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0307549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.329792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA ACATCGCAGC CGAAGAGCGG CAGACTGTTC ACTACATCGG CGTTCCCATC 
AGCGCCCGAT TCTCGGAATT CGGCGCGCCC GGCGGGCCGA ACGAGGCGAT CCCGCGGATC
TATCAGTGGC TGGGCGAGCA CCAGGTTGCG CCGCTTGGCG GGCCTCTCTA CGTCTACCGT
CACATCGGAA ACAGTGATGA CACGGTTGAC CTCACCGTCG CGGTGCCGAT CGCCGGACCG
GTCAAGCCGA CAGACGGTCT CGTTCTCGGT GCCCTCCCGG CAGGCACCTA CGTCGTCGGC
CGTCATGTCG GCGCGCCCGA TGCCATCCCG GCGGCGCACA GCGAGGTCAA GAAATGGGCC
GAGGCCAACG GGCATCGCCT CGACGTCCTC GAAGACGACA ACGGTGGACT GTGGACCGGC
CACGCGGAGC ACTTCCTCAC CGATCCCGCA GAAGAGCCGG ACCGCTCCAA GTGGGCCACC
GATCTGCTGT TCAAGACCGT CTGA
 
Protein sequence
MALNIAAEER QTVHYIGVPI SARFSEFGAP GGPNEAIPRI YQWLGEHQVA PLGGPLYVYR 
HIGNSDDTVD LTVAVPIAGP VKPTDGLVLG ALPAGTYVVG RHVGAPDAIP AAHSEVKKWA
EANGHRLDVL EDDNGGLWTG HAEHFLTDPA EEPDRSKWAT DLLFKTV