12 homologs were found in PanDaTox collection
for query gene Ksed_20280 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013169  Ksed_20280  transcriptional regulator, effector-binding domain/component  100 
 
 		 167 aa  338  2.9999999999999998e-92  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0307549  normal  0.329792 
 
 
-
 
NC_013510  Tcur_0263  transcription activator, effector binding protein  32.73 
 
 		 166 aa  102  2e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_1132  transcription activator, effector binding  32.7 
 
 		 164 aa  88.6  4e-17  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6627  transcriptional activator ligand binding domain protein  33.99 
 
 		 164 aa  81.3  0.000000000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.787104  normal  0.146802 
 
 
-
 
NC_012669  Bcav_1123  transcriptional activator ligand binding domain protein  30.34 
 
 		 177 aa  70.5  0.000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_4913  transcriptional activator ligand binding domain protein  29.69 
 
 		 164 aa  66.6  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00232908  normal  0.22679 
 
 
-
 
NC_013235  Namu_1653  transcriptional activator ligand binding domain protein  33.58 
 
 		 173 aa  62.4  0.000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0385055  normal  0.0308654 
 
 
-
 
NC_008541  Arth_0754  transcription activator, effector binding  27.83 
 
 		 156 aa  52  0.000004  Arthrobacter sp. FB24  Bacteria  normal  0.287281  n/a   
 
 
-
 
NC_008346  Swol_1364  hypothetical protein  28.05 
 
 		 152 aa  50.1  0.00001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.33275  n/a   
 
 
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NC_011886  Achl_2087  transcription activator effector binding  29.57 
 
 		 166 aa  48.9  0.00003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000102768 
 
 
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NC_013440  Hoch_2214  transcriptional activator ligand binding domain protein  32.82 
 
 		 210 aa  47  0.0001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.307481  normal  0.371698 
 
 
-
 
NC_014230  CA2559_07010  hypothetical protein  21.29 
 
 		 343 aa  42.7  0.002  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
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