46 homologs were found in PanDaTox collection
for query gene Veis_2670 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_2670  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
119 aa  245  2e-64  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.767622  normal 
 
 
-
 
NC_012791  Vapar_1503  aromatic-ring-hydroxylating dioxygenase beta subunit  53.23 
 
 
155 aa  123  9e-28  Variovorax paradoxus S110  Bacteria  normal  0.223026  n/a   
 
 
-
 
NC_008786  Veis_2671  Rieske (2Fe-2S) domain-containing protein  85.51 
 
 
441 aa  123  1e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.549347  normal 
 
 
-
 
NC_008786  Veis_2669  aromatic-ring-hydroxylating dioxygenase, beta subunit  98.18 
 
 
154 aa  117  4.9999999999999996e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.819531  normal 
 
 
-
 
NC_012791  Vapar_1502  Rieske (2Fe-2S) domain protein  71.64 
 
 
441 aa  103  1e-21  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_012791  Vapar_1493  Rieske (2Fe-2S) domain protein  50.7 
 
 
437 aa  75.1  0.0000000000003  Variovorax paradoxus S110  Bacteria  normal  0.507919  n/a   
 
 
-
 
NC_008786  Veis_2678  aromatic-ring-hydroxylating dioxygenase, beta subunit  53.97 
 
 
165 aa  65.1  0.0000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1494  aromatic-ring-hydroxylating dioxygenase beta subunit  52.38 
 
 
162 aa  63.2  0.000000001  Variovorax paradoxus S110  Bacteria  normal  0.708283  n/a   
 
 
-
 
NC_009485  BBta_3235  putative toluate 1,2-dioxygenase alpha subunit  40 
 
 
446 aa  58.9  0.00000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.358123 
 
 
-
 
NC_007802  Jann_1344  aromatic-ring-hydroxylating dioxygenase, beta subunit  48.33 
 
 
159 aa  58.9  0.00000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1875  aromatic-ring-hydroxylating dioxygenase, beta subunit  50.82 
 
 
162 aa  59.3  0.00000002  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1994  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.76 
 
 
180 aa  59.3  0.00000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.605287 
 
 
-
 
NC_012792  Vapar_5383  aromatic-ring-hydroxylating dioxygenase beta subunit  57.14 
 
 
162 aa  58.5  0.00000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3236  putative dioxygenase beta subunit  53.57 
 
 
158 aa  56.2  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.665811  normal  0.392142 
 
 
-
 
NC_008786  Veis_2679  Rieske (2Fe-2S) domain-containing protein  47.89 
 
 
437 aa  56.2  0.0000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0637  aromatic-ring-hydroxylating dioxygenase beta subunit  47.27 
 
 
178 aa  54.7  0.0000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1343  Rieske (2Fe-2S) protein  36.23 
 
 
436 aa  51.2  0.000005  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1995  Rieske (2Fe-2S) domain-containing protein  44.93 
 
 
450 aa  50.1  0.00001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7073  ring hydroxylating dioxygenase, alpha subunit  44.26 
 
 
445 aa  50.1  0.00001  Burkholderia sp. 383  Bacteria  normal  0.0267212  normal  0.924215 
 
 
-
 
NC_009511  Swit_1532  aromatic-ring-hydroxylating dioxygenase, beta subunit  45.45 
 
 
162 aa  49.3  0.00002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.014275 
 
 
-
 
NC_009511  Swit_1874  Rieske (2Fe-2S) domain-containing protein  33.33 
 
 
436 aa  47.8  0.00005  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0827  aromatic-ring-hydroxylating dioxygenase, beta subunit  46 
 
 
196 aa  47.8  0.00005  Nocardioides sp. JS614  Bacteria  normal  0.0728938  n/a   
 
 
-
 
NC_009511  Swit_4175  aromatic-ring-hydroxylating dioxygenase, beta subunit  43.55 
 
 
160 aa  47.8  0.00005  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00253481  normal  0.0237067 
 
 
-
 
NC_007509  Bcep18194_C7072  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.27 
 
 
177 aa  47.8  0.00006  Burkholderia sp. 383  Bacteria  decreased coverage  0.00762065  normal  0.538573 
 
 
-
 
NC_009719  Plav_1762  aromatic-ring-hydroxylating dioxygenase beta subunit  44 
 
 
164 aa  46.6  0.0001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.070154 
 
 
-
 
NC_008704  Mkms_5846  3-phenylpropionate dioxygenase subunit beta  43.33 
 
 
185 aa  45.4  0.0003  Mycobacterium sp. KMS  Bacteria  normal  0.585769  normal 
 
 
-
 
NC_008147  Mmcs_5449  3-phenylpropionate dioxygenase subunit beta  43.33 
 
 
185 aa  45.4  0.0003  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0636  Rieske (2Fe-2S) domain protein  38.71 
 
 
455 aa  44.7  0.0005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3193  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  38.89 
 
 
217 aa  44.3  0.0005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0436  aromatic-ring-hydroxylating dioxygenase beta subunit  63.33 
 
 
167 aa  43.9  0.0008  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00439897 
 
 
-
 
NC_009338  Mflv_0631  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.1  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0549  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.1  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1648  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.1  0.001  Mycobacterium sp. JLS  Bacteria  normal  0.341272  normal 
 
 
-
 
NC_008726  Mvan_0534  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.1  0.001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.455054  normal 
 
 
-
 
NC_008705  Mkms_1699  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.1  0.001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.822465 
 
 
-
 
NC_008703  Mkms_5648  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.5  0.001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1674  3-phenylpropionate dioxygenase subunit beta  41.67 
 
 
184 aa  43.1  0.001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5382  Rieske (2Fe-2S) domain protein  38 
 
 
438 aa  42.7  0.001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2111  2-chlorobenzoate 1,2-dioxygenase  38.71 
 
 
162 aa  42.4  0.002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0182348  normal  0.450254 
 
 
-
 
NC_007951  Bxe_A3555  p-cumate dioxygenase small subunit (CmtAc)  54.29 
 
 
180 aa  42.4  0.002  Burkholderia xenovorans LB400  Bacteria  normal  0.0559586  normal  0.808229 
 
 
-
 
NC_009511  Swit_4174  Rieske (2Fe-2S) domain-containing protein  38.46 
 
 
440 aa  42  0.003  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.000409814  normal  0.0305498 
 
 
-
 
NC_008726  Mvan_4416  benzene 1,2-dioxygenase  56.67 
 
 
187 aa  41.6  0.003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.258454  normal 
 
 
-
 
NC_007298  Daro_3245  3-phenylpropionate dioxygenase subunit beta  53.12 
 
 
178 aa  41.2  0.004  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00000856848  normal 
 
 
-
 
NC_007969  Pcryo_1266  2-chlorobenzoate 1,2-dioxygenase  33.82 
 
 
165 aa  41.2  0.005  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2720  toluate 1,2-dioxygenase subunit beta  53.12 
 
 
162 aa  40.8  0.007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.230068  n/a   
 
 
-
 
NC_009511  Swit_4281  aromatic-ring-hydroxylating dioxygenase, beta subunit  46.88 
 
 
187 aa  40  0.01  Sphingomonas wittichii RW1  Bacteria  normal  0.119212  normal  0.807745 
 
 
-
 
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