| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1502 |
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| Symbol | |
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| ID | 7973100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1625176 |
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| End bp | 1626501 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792100 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002943419 |
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| Protein GI | 239814509 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.409233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCT ACCGCCATCA TCCAGACCGC ATCGCCGCGC TCGTGCAGAA CGACCGCGTG
CACCGCGACC TGTACCTGAG CGAGGACATC TTCGCGCTCG AACAGGAGCA CCTGTTCGCG
AACACCTGGG TCTATCTCGG CCACGCGAGC CAGGTGCCGG AGCCGGGCGA CTTCGTGGCG
CAGGACATTG CGGGCCGGCC GCTGCTCATG GTGCGCCAGC CCGACGGCGC GGTGCACGTC
ATGTACAACC GCTGCGCCCA CAAGGGCACG CAGCTCGTGA CCGACGAATG CGGCAACACC
GGCCGCTTCT TCCGCTGCCC CTATCACGCC TGGACCTACA AGCTCGACGG CGCACCACTC
GGTGTGCCGC TGAAGAACGG CTACGAGGGC ACGCAGCTCA AGGCCTGCGA GTCGGGCCGG
GGGCTCTCGG TGGTGAAGCA CGTGAAGGTC TACCGCGACT TCGTCTTCGT GCGGCTCGCG
GACAGCGGCC CCTCGTTCGA GGACTACTTC GGCGAGGTGC TCGGCGCCAT CGACAACATG
GTCGACCGCT CGCCCGAGGG CCGGCTCACG GTTGGCGGCG GCGTGCTGCG CAACATCGTC
CACTGCAACT GGAAGATGTA CCTCGAGAAC ATCAACGACA CGGTGCATCC GATGTCGACG
CACGAGTCGG CCACCAAGGC GGCCGAGGCG CTGTGGGAGG GCCATGCGCC TTCAGACCCC
AAGCCGATGG CAATGGAACA GATCCTGCCC TTCGGCTCGG GCTACGAATT CTTCGACAAG
ATGGGCGGCC GCGTGTTCGC CAACGGCCAC AGCGTGCTGG GCGTGAACTT CAGCATCCAC
TCCAACTACG CGCAGCTGCC GGAGTACGAG GCTGCGATGC GCGCCGCGCA TGGCGAGGAG
CGCGCGGCCG AGATCCTGCA GCGCTCGCCG CAGAACTCGG TCTTCTATCC GAGCCTGTCG
GTCAAGGGCT CGCCGCAGGC CATCCGCGTG ATCCGCCCGC TGGCCGCGGA CCGCACGCTC
GTCGAAGCCT GGAGTTTCCG CGCGGCAGGC GCGCCCGAAC TGCTGTTCGA ACGTGCGATG
AGCTACAACC GGCTCGTGTT CTCGCCGATG TCGGTGGTCG CGCATGACGA CGTGCACCTG
TTCGAGAGCA TCCAGCAGGG CCTGCGCGCG GGCGGCAACG AATGGGTGAG CCTGCACCGC
AATTACGACG CGGCTGAACT CGCGCAATCG ACTCTCACCA CCAACGGCAC CAACGAACTG
CTCATGCGCA ACCAGTTCCG CGCCTGGGCG AAGTCGATGG TGGCGGGCAT GGAGGCCGCG
GCATGA
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| Protein sequence | MTSYRHHPDR IAALVQNDRV HRDLYLSEDI FALEQEHLFA NTWVYLGHAS QVPEPGDFVA
QDIAGRPLLM VRQPDGAVHV MYNRCAHKGT QLVTDECGNT GRFFRCPYHA WTYKLDGAPL
GVPLKNGYEG TQLKACESGR GLSVVKHVKV YRDFVFVRLA DSGPSFEDYF GEVLGAIDNM
VDRSPEGRLT VGGGVLRNIV HCNWKMYLEN INDTVHPMST HESATKAAEA LWEGHAPSDP
KPMAMEQILP FGSGYEFFDK MGGRVFANGH SVLGVNFSIH SNYAQLPEYE AAMRAAHGEE
RAAEILQRSP QNSVFYPSLS VKGSPQAIRV IRPLAADRTL VEAWSFRAAG APELLFERAM
SYNRLVFSPM SVVAHDDVHL FESIQQGLRA GGNEWVSLHR NYDAAELAQS TLTTNGTNEL
LMRNQFRAWA KSMVAGMEAA A
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