| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1493 |
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| Symbol | |
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| ID | 7973091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1614910 |
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| End bp | 1616223 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792091 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002943410 |
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| Protein GI | 239814500 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.507919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCGT ACCGAGACAA CCCCGATGCG ATCCGCGCGC TGGTCCAGGA CGACCGCGTG
CACCGCGACC TGTACACCAG CCAGGAGCTG TTCGAGCTGG AGCAGGAACA CTTCTTCGCC
AACACCTGGA ACTACGTCGG CCACGAGAGC CAGCTGCCCA AGCCCGGTGA CTGGATCAGC
AACGAGATCG CCGGCCGCCC GCTGATCGTC GCGCGCCACT CTGACGGCAG CGTGCGCGCG
ATGATGAACC GCTGCGCCCA CAAGGGCTCG CGGCTGGTGA ACGGGCCTTG CGGCAACACC
GGCAAGTTCT TCCGCTGCCC CTACCACGCC TGGACCTTCA AGACCGACGG TTCGCTGCTG
GCCATTCCGC TGAAGACCGG CTACGAGAAC ACCGCGCTGC ACGCGTGCGA ATCGGCCAAG
GGCCTGACCA CGCTGAAGTA TGTGCGAAGC CACCGCGGCT TCATCTTCGT GAAGATCAGC
GATGCGGGGC CAGGCTTCGA CGACTACTTC GGCGATTCGC TGAGTTCCAT CGACAACATG
GCCGACCGCT CGCCCGAGGG CGAACTGGAG ATTGCCGGCG GCTGCCTGCG CTTCATGCAC
CAGTGCAACT GGAAGATGTT CGTCGAGAAC CTCAACGACA CCATGCACCC GATGGTGGCG
CACGAGTCGT CGGCCGGCAC CGCCAAGCGC ATGTGGGCCG ACAAGCCCGA AGACGAACCC
AAGCCCATGG CGGTGGAGCA GTTCGCGCCC TTCATGTCCG ACTACAAGTT CTTCGAGGAC
ATGGGCATCC GCACCTACGA CAACGGCCAC AGCTTCACGG GCGTGCACTT CAGCATCCAC
AGCAAGTACA AGGCGATCCC CGCGTACGAC GACGCCATGA AGGCGCGCTA TGGCGAGGAA
AAGACCGCGC AGATCCTCGG CATGGCGCGA CACAACACGG TGTACTACCC CAACCTCACG
ATCAAGGGCG CGATCCAGGC GATCCGCGTG GTCAAGCCGA TCTCGGCCGA CAGGACGCTG
ATCGAGAGCT GGACCTTCCG CCTCAAGGGC GCGCCGCCCG AGCTGCTGCA GCGCACCACC
ATGTACAACC GGCTCATCAA CTCGCCGTTC TCGGTGGTTG GGCACGACGA CCTGCAGGCC
TACCGCGGCA TGCAGGCCGG CCTGCACGCA AGCGGCAACG AGTGGGTGAG CCTGCATCGC
AACTACGACC CGGCCGAGCT GAAGGGCGGG GAGATCACCA CCGGCGGCAC CAACGAGCTG
CCGATGCGCA ACCAGTACCG CGCGTGGGTG CAGCGCATGA CGGAGACGAT GTGA
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| Protein sequence | MTSYRDNPDA IRALVQDDRV HRDLYTSQEL FELEQEHFFA NTWNYVGHES QLPKPGDWIS
NEIAGRPLIV ARHSDGSVRA MMNRCAHKGS RLVNGPCGNT GKFFRCPYHA WTFKTDGSLL
AIPLKTGYEN TALHACESAK GLTTLKYVRS HRGFIFVKIS DAGPGFDDYF GDSLSSIDNM
ADRSPEGELE IAGGCLRFMH QCNWKMFVEN LNDTMHPMVA HESSAGTAKR MWADKPEDEP
KPMAVEQFAP FMSDYKFFED MGIRTYDNGH SFTGVHFSIH SKYKAIPAYD DAMKARYGEE
KTAQILGMAR HNTVYYPNLT IKGAIQAIRV VKPISADRTL IESWTFRLKG APPELLQRTT
MYNRLINSPF SVVGHDDLQA YRGMQAGLHA SGNEWVSLHR NYDPAELKGG EITTGGTNEL
PMRNQYRAWV QRMTETM
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