| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1343 |
|---|
| Symbol | |
|---|
| ID | 3933790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1308767 |
|---|
| End bp | 1310077 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637903693 |
|---|
| Product | Rieske (2Fe-2S) protein |
|---|
| Protein accession | YP_509285 |
|---|
| Protein GI | 89053834 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCG ATCAAATCCG GGGCCTCGTG CAAGGCCACC AGGTCCACCG CGATGTCTAC
ACCAGCCAGG ACGTCTACCG CGCAGAGATG CGGCACCTGT TCGCCAACAC CTGGGTCTTT
GTCGGCCACG ACAGTCAGAC GCCGGGCAAG GGCGACTATA TCACCACGCA GATCGGCGAT
CAGCCGGTTA TTCAAGTGCG CCATTCCGAT GGAGAGATCA AAGTCCTCCA CAATCGCTGC
CCCCACAAAG GCACAAAGAT TGCGATTGAT CGACAGGGCA ACACCGGTAA GTTCTTTCGA
TGCCCCTACC ATGCCTGGAG CTTCAAGACA GATGGCTGCC CTTTGGCGAT CCCGCTGAAG
AAGGGGTATG AAGGCACCGG CCTGCAACAG ACGGAAAATG CGGGCGGCAT CAAGCCTGTG
GGTGCGGTGC ACGTGTATCG CGGCTTCGTC TTCGCGCGTC TGGCGTCTGA GGGGATCGGG
TTCGAGGCGT TTTTCGGCGA TAGTCTCAGT TCTATCGACA ACATGGTTGA CCGCGCGCCA
GAGGGGCGGC TGGAAGTCTC AGGACCGCCG CTGCGCTACA TGCATAAGTG CAACTGGAAA
ATGCTGGTCG AAAACCAGAC CGATACCTGT CACCCGATGG TGGCGCATGA AAGTTCGGCC
GGGACTGCGA TTGATATCTT CAAGTCCATG GGCGAGCCCG AGCCGCGCCC CGCTGCGATG
CAGATCATAG CCCCCTTCAT GTCGGCCTAT GAGTTCTTTG AGGAGATGGG CATTCGCACC
TGGCCCAACG GCCATGGGCA CACCGGTGTC AACATGTCGA TCCACTCCAA CTATGATGCC
TTTCCCGGAT ATTTTGACGC GATGACAAAG GCCTACGGGG AGGATCGCGC CAAGGCTATT
CTGGATGAGA ACCGCCATAA CACCGTTTAT TTCCCGAATG TGATGGTCAA AGCGCCATTG
GCACAATTGC GCAACTTCAT CCCCATGGGC CCGAACAAGA CGCTGGTGGA AAGCTATGTC
TATCGCCCCG TGGGTGCGCC CGATGAGATG ACCGCCATGT CGGCAATGTA TAACCGGATG
ATCAATGCGC CGACCTCCAT CGTCGGGCAC GATGACCTGG AGATGTACGA GCGTGCGCAG
GAGGGTCTGA TGTCCAACGG GCTGGAGTGG GTGAACCTGC AACGCCTATA CGAGGAAGAT
GAAGATTTCA GCGAAGAGGC GGTTGAGAAC GGCACGACCG AGCGGCAAAT GCGCAATCAG
TTCAACGCCT GGGTCAAGTT CATGACCGTG GACGCGGAGG CTGCGCCATG A
|
|---|
| Protein sequence | MTPDQIRGLV QGHQVHRDVY TSQDVYRAEM RHLFANTWVF VGHDSQTPGK GDYITTQIGD
QPVIQVRHSD GEIKVLHNRC PHKGTKIAID RQGNTGKFFR CPYHAWSFKT DGCPLAIPLK
KGYEGTGLQQ TENAGGIKPV GAVHVYRGFV FARLASEGIG FEAFFGDSLS SIDNMVDRAP
EGRLEVSGPP LRYMHKCNWK MLVENQTDTC HPMVAHESSA GTAIDIFKSM GEPEPRPAAM
QIIAPFMSAY EFFEEMGIRT WPNGHGHTGV NMSIHSNYDA FPGYFDAMTK AYGEDRAKAI
LDENRHNTVY FPNVMVKAPL AQLRNFIPMG PNKTLVESYV YRPVGAPDEM TAMSAMYNRM
INAPTSIVGH DDLEMYERAQ EGLMSNGLEW VNLQRLYEED EDFSEEAVEN GTTERQMRNQ
FNAWVKFMTV DAEAAP
|
|---|
| |