| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0636 |
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| Symbol | |
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| ID | 7973621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 693032 |
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| End bp | 694399 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791243 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002942564 |
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| Protein GI | 239813654 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACG ACGAACTGGC AAAGCTGTTC AGGCCGGGCA GCGTGCACAA ACGGCTCTAC
ACCGACAAAG ACATCTTCGA CCTGGAGATG AACCGCATCT ACGGCCAGGC CTGGATCTAC
GTCGGCCACC AAAGCCAGGT GCCCAGGCCC GGTGACTACC ACGCGACGCG CATCGGCGAT
CAGGACGTGG TGATGGTGCG CGGCAGCGAC GGCCAAGTGA GCGTGCTCTA CAACCGCTGC
CCGCACAAGG GTGCCAAGCT GGTGACCGAA GGCGACGGCT GCGCGGGCAA GTTCTTCCGC
TGCCCTTACC ACGCCTGGAC CTTCAAGCTC GATGGCACAC ACATGTCGCT GCCGCTGCGC
GCCGGCCTGG AAGGCACCTG CTACAGCGCC GACAACCCCG ACTTCTCCAT GAAGCGACTG
GCGCGCGTCG ACCAGTACCG CGGTTTCGTC TTCGCCTCGC AGAGCGCGAG CGGGCCCGAC
CTGCGCGAGT TCCTCGGCGG CAGCGCGAGC ACCATCGACA ACCTGTGTGA TCGCTCGCCG
GTGGGCGAGG TCGAAGTGGC GGGCGGTGTG TTCCGCGTCA TGCAGCAGTC GAACTGGAAG
GTGTTCTACG AGAACCTGCA CGACACCATG CACGCGCCGG CCACGCACGA GTCCTCGGTG
GTCGCCGCGC GCGAGCAGTC CAAGGCCATC GGCGACATGC CTTTCGAGCT GCTGATCCAG
GAAGGCAATG GCGAACCCTG GGCCTTCTGG GAAGCGCTCG AGTTGCGCGC CTACCCCTAC
GGGCACGGCT ATATGGAAGG CATCTTCGAC CCCAACGCAG CCGAGAAGGA CGCCGTCACC
AAGGCCCACC AGGCCTCGCT GATCGCCGCG CACGGCGCCG AGCGCGCACG CGAGATCATG
GGCATGAACC GCCACAACAC CATCATCTAC GGCAGCGGTT CGCCCCACAA CGTGTTCCAG
CAGTTCCGCG TCATCCGCCC GATCGCTGTG GACCGCACAC TGATCGAGAT CCAAGTGTTC
CGTTGCAAGG AGGCGCCGCA GGCGGTGTTC GACCGCGCCC TGGTCTACGC CAACCTCATC
AACTCACCCT CGTCCAACGT CATGCCCGAT GACGTCGAGC TCTACCGCCG TTGCCAAGAG
GGCAATAGCA CGCGCGGCGG CGACTGGGTG TCGCAGCACC GGTACCTCGG CACCGACAAG
TCCATGCCCG ACGGCGGGGC TGTGTCCATC AATGGCACCA GCGAACTGCC CATGCGCAAC
CAGATGGCCG CGTGGCGCCA CTACATGTTG GGCGACGACG TGTCCCCCGA ACAAGAAGCG
GCCTGGACCG GCCGCACCCC ATTGAGTACC GCAGGAGCCC AGGCGTGA
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| Protein sequence | MTNDELAKLF RPGSVHKRLY TDKDIFDLEM NRIYGQAWIY VGHQSQVPRP GDYHATRIGD
QDVVMVRGSD GQVSVLYNRC PHKGAKLVTE GDGCAGKFFR CPYHAWTFKL DGTHMSLPLR
AGLEGTCYSA DNPDFSMKRL ARVDQYRGFV FASQSASGPD LREFLGGSAS TIDNLCDRSP
VGEVEVAGGV FRVMQQSNWK VFYENLHDTM HAPATHESSV VAAREQSKAI GDMPFELLIQ
EGNGEPWAFW EALELRAYPY GHGYMEGIFD PNAAEKDAVT KAHQASLIAA HGAERAREIM
GMNRHNTIIY GSGSPHNVFQ QFRVIRPIAV DRTLIEIQVF RCKEAPQAVF DRALVYANLI
NSPSSNVMPD DVELYRRCQE GNSTRGGDWV SQHRYLGTDK SMPDGGAVSI NGTSELPMRN
QMAAWRHYML GDDVSPEQEA AWTGRTPLST AGAQA
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