61 homologs were found in PanDaTox collection
for query gene Saro_3867 on replicon NC_009426
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009426  Saro_3867  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
163 aa  343  6e-94  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.996924  n/a   
 
 
-
 
NC_009426  Saro_3860  aromatic-ring-hydroxylating dioxygenase, beta subunit  48.34 
 
 
162 aa  163  1.0000000000000001e-39  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.705611  n/a   
 
 
-
 
NC_007951  Bxe_A1108  ortho-halobenzoate-1,2-dioxygenase, beta subunit  50.33 
 
 
176 aa  158  3e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1120  anthranilate dioxygenase, small subunit (AndAd)  36.94 
 
 
157 aa  128  3e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1469  aromatic-ring-hydroxylating dioxygenase beta subunit  36.05 
 
 
158 aa  126  2.0000000000000002e-28  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010086  Bmul_4956  aromatic-ring-hydroxylating dioxygenase beta subunit  38.85 
 
 
162 aa  124  5e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.255127  normal 
 
 
-
 
NC_009078  BURPS1106A_A2562  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.88 
 
 
171 aa  124  6e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2706  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.88 
 
 
171 aa  124  6e-28  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0489  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  41.61 
 
 
161 aa  124  6e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0235  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.88 
 
 
171 aa  124  7e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1576  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.88 
 
 
171 aa  124  7e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  0.446034  n/a   
 
 
-
 
NC_008784  BMASAVP1_1379  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.88 
 
 
171 aa  124  7e-28  Burkholderia mallei SAVP1  Bacteria  normal  0.309833  n/a   
 
 
-
 
NC_006349  BMAA0204  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  40.88 
 
 
165 aa  124  8.000000000000001e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0982  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  40.88 
 
 
165 aa  124  8.000000000000001e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5503  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.3 
 
 
162 aa  122  2e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.361492  normal 
 
 
-
 
NC_010552  BamMC406_3668  aromatic-ring-hydroxylating dioxygenase beta subunit  41.3 
 
 
162 aa  122  2e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.782299 
 
 
-
 
NC_010515  Bcenmc03_3747  aromatic-ring-hydroxylating dioxygenase beta subunit  41.3 
 
 
158 aa  122  3e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0585966  normal 
 
 
-
 
NC_008543  Bcen2424_3776  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.58 
 
 
158 aa  120  8e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.408818 
 
 
-
 
NC_008061  Bcen_4587  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.58 
 
 
158 aa  120  8e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.892698  n/a   
 
 
-
 
NC_007952  Bxe_B2751  putative terephthalate 1,2-dioxygenase, small subunit (TphA2)  38.78 
 
 
156 aa  119  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2324  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.58 
 
 
162 aa  119  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1109  anthranilate dioxygenase, small subunit (AndAd)  34.39 
 
 
157 aa  119  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235119 
 
 
-
 
NC_007952  Bxe_B2347  putative aromatic dioxygenase, beta subunit  33.12 
 
 
167 aa  116  9.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4720  aromatic-ring-hydroxylating dioxygenase, beta subunit  34 
 
 
156 aa  110  1.0000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1101  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.33 
 
 
159 aa  109  1.0000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.699365  normal 
 
 
-
 
NC_007948  Bpro_0984  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.61 
 
 
162 aa  102  2e-21  Polaromonas sp. JS666  Bacteria  normal  0.147739  hitchhiker  0.000202468 
 
 
-
 
NC_009511  Swit_3057  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.01 
 
 
158 aa  100  1e-20  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0219432 
 
 
-
 
NC_010524  Lcho_0796  aromatic-ring-hydroxylating dioxygenase beta subunit  30.87 
 
 
160 aa  98.2  5e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_0166  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.21 
 
 
162 aa  96.3  2e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.000302415 
 
 
-
 
NC_009654  Mmwyl1_2670  aromatic-ring-hydroxylating dioxygenase beta subunit  32.89 
 
 
162 aa  94.7  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.445866  normal 
 
 
-
 
NC_012792  Vapar_5348  aromatic-ring-hydroxylating dioxygenase beta subunit  29.49 
 
 
156 aa  92.4  2e-18  Variovorax paradoxus S110  Bacteria  normal  0.0824141  n/a   
 
 
-
 
NC_003295  RSc1089  putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein  29.08 
 
 
157 aa  89.7  2e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  0.333819  normal 
 
 
-
 
NC_008781  Pnap_2487  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.12 
 
 
161 aa  84  9e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.697863  normal 
 
 
-
 
NC_012791  Vapar_4291  aromatic-ring-hydroxylating dioxygenase beta subunit  24.67 
 
 
171 aa  80.1  0.00000000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0942  putative ring dioxygenase beta subunit  23.57 
 
 
160 aa  74.7  0.0000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3775  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.81 
 
 
174 aa  73.2  0.000000000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4604  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.27 
 
 
158 aa  68.9  0.00000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3712  salicylate 5-hydroxylase (oxygenase small subunit)  29.17 
 
 
158 aa  68.9  0.00000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0366284 
 
 
-
 
NC_008781  Pnap_2462  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.13 
 
 
109 aa  60.1  0.00000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.200723  normal 
 
 
-
 
NC_009426  Saro_3834  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.71 
 
 
165 aa  56.2  0.0000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.3224  n/a   
 
 
-
 
NC_009511  Swit_0895  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.73 
 
 
166 aa  51.2  0.000006  Sphingomonas wittichii RW1  Bacteria  normal  0.237338  normal  0.228305 
 
 
-
 
NC_007974  Rmet_4883  benzoate 1,2-dioxygenase subunit beta  24.29 
 
 
164 aa  48.1  0.00005  Cupriavidus metallidurans CH34  Bacteria  normal  0.0428911  normal  0.181589 
 
 
-
 
NC_009077  Mjls_2232  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  47.8  0.00006  Mycobacterium sp. JLS  Bacteria  normal  0.201488  normal 
 
 
-
 
NC_008703  Mkms_5631  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  47.8  0.00006  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5351  benzoate 1,2-dioxygenase, small subunit  22.92 
 
 
167 aa  47  0.0001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.449745 
 
 
-
 
NC_009077  Mjls_1622  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  46.6  0.0001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0493  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  47  0.0001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.332253  normal 
 
 
-
 
NC_008146  Mmcs_1647  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  46.6  0.0001  Mycobacterium sp. MCS  Bacteria  normal  0.416778  n/a   
 
 
-
 
NC_008705  Mkms_1673  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  46.6  0.0001  Mycobacterium sp. KMS  Bacteria  normal  0.665274  normal 
 
 
-
 
NC_009338  Mflv_0562  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  45.1  0.0004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2724  anthranilate dioxygenase small subunit  23.44 
 
 
163 aa  45.1  0.0004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.248369  n/a   
 
 
-
 
NC_009338  Mflv_0657  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.74 
 
 
165 aa  45.1  0.0004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4404  2-chlorobenzoate 1,2-dioxygenase  22.92 
 
 
163 aa  44.3  0.0008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1875  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.94 
 
 
162 aa  43.9  0.0009  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4159  benzoate 1,2-dioxygenase, small subunit  24.68 
 
 
181 aa  43.9  0.001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.712193  n/a   
 
 
-
 
NC_008463  PA14_37550  putative ring-hydroxylating dioxygenase small subunit  30.84 
 
 
169 aa  42.7  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0448308  normal 
 
 
-
 
NC_008463  PA14_32150  anthranilate dioxygenase small subunit  21.79 
 
 
163 aa  42.7  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.447185  normal 
 
 
-
 
NC_009338  Mflv_1354  2-chlorobenzoate 1,2-dioxygenase  21.71 
 
 
179 aa  41.2  0.005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.160412  normal  0.158721 
 
 
-
 
NC_009511  Swit_1757  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.44 
 
 
175 aa  41.2  0.006  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0827  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.69 
 
 
196 aa  40.8  0.007  Nocardioides sp. JS614  Bacteria  normal  0.0728938  n/a   
 
 
-
 
NC_007952  Bxe_B0914  benzoate 1,2-dioxygenase subunit beta BenB  20.83 
 
 
163 aa  41.2  0.007  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.419753 
 
 
-
 
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