54 homologs were found in PanDaTox collection
for query gene Swit_0895 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_0895  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
166 aa  345  2e-94  Sphingomonas wittichii RW1  Bacteria  normal  0.237338  normal  0.228305 
 
 
-
 
NC_008703  Mkms_5631  aromatic-ring-hydroxylating dioxygenase, beta subunit  49.03 
 
 
165 aa  162  2.0000000000000002e-39  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2232  aromatic-ring-hydroxylating dioxygenase, beta subunit  49.03 
 
 
165 aa  161  4.0000000000000004e-39  Mycobacterium sp. JLS  Bacteria  normal  0.201488  normal 
 
 
-
 
NC_008726  Mvan_0493  aromatic-ring-hydroxylating dioxygenase, beta subunit  48.39 
 
 
165 aa  159  1e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.332253  normal 
 
 
-
 
NC_008705  Mkms_1673  aromatic-ring-hydroxylating dioxygenase, beta subunit  48.39 
 
 
165 aa  158  3e-38  Mycobacterium sp. KMS  Bacteria  normal  0.665274  normal 
 
 
-
 
NC_009077  Mjls_1622  aromatic-ring-hydroxylating dioxygenase, beta subunit  48.39 
 
 
165 aa  158  3e-38  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1647  aromatic-ring-hydroxylating dioxygenase, beta subunit  48.39 
 
 
165 aa  158  3e-38  Mycobacterium sp. MCS  Bacteria  normal  0.416778  n/a   
 
 
-
 
NC_009338  Mflv_0562  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.74 
 
 
165 aa  157  5e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0657  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.74 
 
 
165 aa  157  5e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_3834  aromatic-ring-hydroxylating dioxygenase, beta subunit  40 
 
 
165 aa  113  1.0000000000000001e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.3224  n/a   
 
 
-
 
NC_008752  Aave_0166  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.09 
 
 
162 aa  74.3  0.0000000000007  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.000302415 
 
 
-
 
NC_011666  Msil_1469  aromatic-ring-hydroxylating dioxygenase beta subunit  27.22 
 
 
158 aa  69.3  0.00000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc1089  putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein  30.77 
 
 
157 aa  68.2  0.00000000006  Ralstonia solanacearum GMI1000  Bacteria  normal  0.333819  normal 
 
 
-
 
NC_007948  Bpro_0984  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.21 
 
 
162 aa  65.9  0.0000000003  Polaromonas sp. JS666  Bacteria  normal  0.147739  hitchhiker  0.000202468 
 
 
-
 
NC_010524  Lcho_0796  aromatic-ring-hydroxylating dioxygenase beta subunit  29.5 
 
 
160 aa  64.3  0.0000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009426  Saro_3860  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.08 
 
 
162 aa  60.1  0.00000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.705611  n/a   
 
 
-
 
NC_009511  Swit_3057  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.77 
 
 
158 aa  60.5  0.00000001  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0219432 
 
 
-
 
NC_009654  Mmwyl1_2670  aromatic-ring-hydroxylating dioxygenase beta subunit  25.16 
 
 
162 aa  58.9  0.00000003  Marinomonas sp. MWYL1  Bacteria  normal  0.445866  normal 
 
 
-
 
NC_007952  Bxe_B2347  putative aromatic dioxygenase, beta subunit  28.75 
 
 
167 aa  58.5  0.00000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5348  aromatic-ring-hydroxylating dioxygenase beta subunit  28.15 
 
 
156 aa  57.8  0.00000006  Variovorax paradoxus S110  Bacteria  normal  0.0824141  n/a   
 
 
-
 
NC_007953  Bxe_C1120  anthranilate dioxygenase, small subunit (AndAd)  29.25 
 
 
157 aa  57.4  0.00000008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4956  aromatic-ring-hydroxylating dioxygenase beta subunit  29.14 
 
 
162 aa  56.2  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.255127  normal 
 
 
-
 
NC_007348  Reut_B4720  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.62 
 
 
156 aa  56.2  0.0000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2487  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.14 
 
 
161 aa  55.8  0.0000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.697863  normal 
 
 
-
 
NC_012791  Vapar_4291  aromatic-ring-hydroxylating dioxygenase beta subunit  28.75 
 
 
171 aa  54.7  0.0000006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3776  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.89 
 
 
158 aa  54.3  0.0000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.408818 
 
 
-
 
NC_007511  Bcep18194_B2324  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.89 
 
 
162 aa  54.3  0.0000007  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4587  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.89 
 
 
158 aa  54.3  0.0000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.892698  n/a   
 
 
-
 
NC_010552  BamMC406_3668  aromatic-ring-hydroxylating dioxygenase beta subunit  27.89 
 
 
162 aa  54.3  0.0000008  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.782299 
 
 
-
 
NC_008391  Bamb_5503  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.89 
 
 
162 aa  54.3  0.0000008  Burkholderia ambifaria AMMD  Bacteria  normal  0.361492  normal 
 
 
-
 
NC_010515  Bcenmc03_3747  aromatic-ring-hydroxylating dioxygenase beta subunit  27.89 
 
 
158 aa  53.5  0.000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0585966  normal 
 
 
-
 
NC_009426  Saro_3867  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.73 
 
 
163 aa  51.2  0.000006  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.996924  n/a   
 
 
-
 
NC_007952  Bxe_B1109  anthranilate dioxygenase, small subunit (AndAd)  27.89 
 
 
157 aa  51.2  0.000006  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235119 
 
 
-
 
NC_006349  BMAA0204  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  26.53 
 
 
165 aa  50.1  0.00001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0982  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  26.53 
 
 
165 aa  50.1  0.00001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1101  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.83 
 
 
159 aa  50.1  0.00001  Burkholderia xenovorans LB400  Bacteria  normal  0.699365  normal 
 
 
-
 
NC_009079  BMA10247_A0235  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.53 
 
 
171 aa  50.4  0.00001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1379  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.53 
 
 
171 aa  50.4  0.00001  Burkholderia mallei SAVP1  Bacteria  normal  0.309833  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2562  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.53 
 
 
171 aa  50.4  0.00001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1576  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.53 
 
 
171 aa  50.4  0.00001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.446034  n/a   
 
 
-
 
NC_009075  BURPS668_A2706  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.53 
 
 
171 aa  50.4  0.00001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4604  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.59 
 
 
158 aa  50.1  0.00002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0489  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  26.53 
 
 
161 aa  49.7  0.00002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1596  3-phenylpropionate dioxygenase subunit beta  25 
 
 
199 aa  47  0.0001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1108  ortho-halobenzoate-1,2-dioxygenase, beta subunit  28.1 
 
 
176 aa  47  0.0001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0464  3-phenylpropionate dioxygenase subunit beta  25 
 
 
198 aa  46.6  0.0002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.233326  normal 
 
 
-
 
NC_009338  Mflv_0684  3-phenylpropionate dioxygenase subunit beta  24.31 
 
 
198 aa  45.1  0.0005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0594  3-phenylpropionate dioxygenase subunit beta  24.31 
 
 
199 aa  44.7  0.0006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.767333  normal 
 
 
-
 
NC_007348  Reut_B3775  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.83 
 
 
174 aa  44.3  0.0007  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2751  putative terephthalate 1,2-dioxygenase, small subunit (TphA2)  25.15 
 
 
156 aa  42.7  0.002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1648  3-phenylpropionate dioxygenase subunit beta  23.61 
 
 
198 aa  43.1  0.002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1623  3-phenylpropionate dioxygenase subunit beta  23.61 
 
 
198 aa  43.1  0.002  Mycobacterium sp. MCS  Bacteria  normal  0.0450765  n/a   
 
 
-
 
NC_008538  Arth_4364  3-phenylpropionate dioxygenase subunit beta  23.74 
 
 
199 aa  42  0.004  Arthrobacter sp. FB24  Bacteria  normal  0.0405375  n/a   
 
 
-
 
NC_008703  Mkms_5640  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.95 
 
 
180 aa  41.6  0.004  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
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