Gene Saro_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3860 
Symbol 
ID5077471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp27776 
End bp28264 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID640480969 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001165631 
Protein GI146275470 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.705611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTG CAGCCGAAGT AGCGCAAGTC GCGCAAAGTG CGATCGACGA TTTCAACGCG 
GCTTACGGGC TTTGCCTTGA TGATGACCGG CTCGAGCAAT GGCCCACGCT GTTCGTTGAC
GATTGCCTGT ACCAGGTGAT CGCGCGCGAG AATGTCGATA ACGGCTTGCC CGCAGCTGTG
ATGTATTGCG ACAGCAAAGG GATGCTGGCG GATCGGGTTG TCGCGCTGCG CAAGGCAAAC
GTCTTCCCCG AACATTTCAA CCGGCACCTG ATCGGGCGTG CGGTGATCAC CGGCGTGGAA
GGCGACCAGG TTTCTGCTGA AGCCAGCTAT GTCGTCTTCC AGACCCGTAA CGATGGTGAA
ACGCGCATCT ACAATGCCGG CAAATATGTC GATCGGTTTG ATCTTAGCGG TGGAACCGTT
CGACTGAAAA GCCGGACCTG CATCTATGAC ACGCTGCGCA TCGCCACGCT GTTGGCGACC
CCGATCTGA
 
Protein sequence
MSVAAEVAQV AQSAIDDFNA AYGLCLDDDR LEQWPTLFVD DCLYQVIARE NVDNGLPAAV 
MYCDSKGMLA DRVVALRKAN VFPEHFNRHL IGRAVITGVE GDQVSAEASY VVFQTRNDGE
TRIYNAGKYV DRFDLSGGTV RLKSRTCIYD TLRIATLLAT PI