53 homologs were found in PanDaTox collection
for query gene Bamb_5503 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008391  Bamb_5503  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
162 aa  338  1e-92  Burkholderia ambifaria AMMD  Bacteria  normal  0.361492  normal 
 
 
-
 
NC_010552  BamMC406_3668  aromatic-ring-hydroxylating dioxygenase beta subunit  100 
 
 
162 aa  338  1e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.782299 
 
 
-
 
NC_007511  Bcep18194_B2324  aromatic-ring-hydroxylating dioxygenase, beta subunit  97.53 
 
 
162 aa  331  3e-90  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3747  aromatic-ring-hydroxylating dioxygenase beta subunit  98.73 
 
 
158 aa  328  2e-89  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0585966  normal 
 
 
-
 
NC_008543  Bcen2424_3776  aromatic-ring-hydroxylating dioxygenase, beta subunit  97.47 
 
 
158 aa  323  4.0000000000000003e-88  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.408818 
 
 
-
 
NC_008061  Bcen_4587  aromatic-ring-hydroxylating dioxygenase, beta subunit  97.47 
 
 
158 aa  323  4.0000000000000003e-88  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.892698  n/a   
 
 
-
 
NC_010086  Bmul_4956  aromatic-ring-hydroxylating dioxygenase beta subunit  94.44 
 
 
162 aa  322  2e-87  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.255127  normal 
 
 
-
 
NC_007952  Bxe_B1109  anthranilate dioxygenase, small subunit (AndAd)  82.05 
 
 
157 aa  280  6.000000000000001e-75  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235119 
 
 
-
 
NC_007953  Bxe_C1120  anthranilate dioxygenase, small subunit (AndAd)  81.41 
 
 
157 aa  277  4e-74  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1576  aromatic-ring-hydroxylating dioxygenase, beta subunit  83.33 
 
 
171 aa  275  2e-73  Burkholderia mallei NCTC 10229  Bacteria  normal  0.446034  n/a   
 
 
-
 
NC_009075  BURPS668_A2706  aromatic-ring-hydroxylating dioxygenase, beta subunit  83.33 
 
 
171 aa  275  2e-73  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2562  aromatic-ring-hydroxylating dioxygenase, beta subunit  83.33 
 
 
171 aa  275  2e-73  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0235  aromatic-ring-hydroxylating dioxygenase, beta subunit  83.33 
 
 
171 aa  275  2e-73  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1379  aromatic-ring-hydroxylating dioxygenase, beta subunit  83.33 
 
 
171 aa  275  2e-73  Burkholderia mallei SAVP1  Bacteria  normal  0.309833  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0982  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  83.33 
 
 
165 aa  275  2e-73  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0204  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  83.33 
 
 
165 aa  275  2e-73  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0489  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  82.61 
 
 
161 aa  273  6e-73  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1101  aromatic-ring-hydroxylating dioxygenase, beta subunit  57.32 
 
 
159 aa  193  7e-49  Burkholderia xenovorans LB400  Bacteria  normal  0.699365  normal 
 
 
-
 
NC_007951  Bxe_A1108  ortho-halobenzoate-1,2-dioxygenase, beta subunit  48 
 
 
176 aa  153  1e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_3860  aromatic-ring-hydroxylating dioxygenase, beta subunit  45.99 
 
 
162 aa  145  2.0000000000000003e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.705611  n/a   
 
 
-
 
NC_011666  Msil_1469  aromatic-ring-hydroxylating dioxygenase beta subunit  41.29 
 
 
158 aa  144  7.0000000000000006e-34  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009426  Saro_3867  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.3 
 
 
163 aa  122  2e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.996924  n/a   
 
 
-
 
NC_008752  Aave_0166  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.13 
 
 
162 aa  120  8e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.000302415 
 
 
-
 
NC_008781  Pnap_2487  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.48 
 
 
161 aa  115  1.9999999999999998e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.697863  normal 
 
 
-
 
NC_007952  Bxe_B2347  putative aromatic dioxygenase, beta subunit  35.22 
 
 
167 aa  111  5e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5348  aromatic-ring-hydroxylating dioxygenase beta subunit  30.97 
 
 
156 aa  110  6e-24  Variovorax paradoxus S110  Bacteria  normal  0.0824141  n/a   
 
 
-
 
NC_010524  Lcho_0796  aromatic-ring-hydroxylating dioxygenase beta subunit  32.47 
 
 
160 aa  110  6e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B2751  putative terephthalate 1,2-dioxygenase, small subunit (TphA2)  32.68 
 
 
156 aa  110  9e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0984  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.68 
 
 
162 aa  108  3e-23  Polaromonas sp. JS666  Bacteria  normal  0.147739  hitchhiker  0.000202468 
 
 
-
 
NC_007348  Reut_B3775  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.77 
 
 
174 aa  103  1e-21  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4720  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.92 
 
 
156 aa  101  4e-21  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3057  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.42 
 
 
158 aa  100  8e-21  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0219432 
 
 
-
 
NC_012791  Vapar_4291  aromatic-ring-hydroxylating dioxygenase beta subunit  29.53 
 
 
171 aa  97.4  7e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1089  putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein  28.39 
 
 
157 aa  97.4  7e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.333819  normal 
 
 
-
 
NC_007953  Bxe_C0942  putative ring dioxygenase beta subunit  30 
 
 
160 aa  93.6  1e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2670  aromatic-ring-hydroxylating dioxygenase beta subunit  30.28 
 
 
162 aa  90.9  6e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.445866  normal 
 
 
-
 
NC_008786  Veis_4604  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.17 
 
 
158 aa  87.8  5e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3712  salicylate 5-hydroxylase (oxygenase small subunit)  27.15 
 
 
158 aa  74.7  0.0000000000005  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0366284 
 
 
-
 
NC_008781  Pnap_2462  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.35 
 
 
109 aa  65.1  0.0000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.200723  normal 
 
 
-
 
NC_009511  Swit_0895  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.89 
 
 
166 aa  54.3  0.0000008  Sphingomonas wittichii RW1  Bacteria  normal  0.237338  normal  0.228305 
 
 
-
 
NC_008703  Mkms_5631  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.82 
 
 
165 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0493  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.82 
 
 
165 aa  49.3  0.00002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.332253  normal 
 
 
-
 
NC_009077  Mjls_2232  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.82 
 
 
165 aa  49.3  0.00002  Mycobacterium sp. JLS  Bacteria  normal  0.201488  normal 
 
 
-
 
NC_008705  Mkms_1673  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.72 
 
 
165 aa  48.5  0.00004  Mycobacterium sp. KMS  Bacteria  normal  0.665274  normal 
 
 
-
 
NC_009077  Mjls_1622  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.72 
 
 
165 aa  48.5  0.00004  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1647  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.72 
 
 
165 aa  48.5  0.00004  Mycobacterium sp. MCS  Bacteria  normal  0.416778  n/a   
 
 
-
 
NC_009338  Mflv_0657  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.09 
 
 
165 aa  47.8  0.00006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0562  aromatic-ring-hydroxylating dioxygenase, beta subunit  24.09 
 
 
165 aa  47.8  0.00006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0889  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.81 
 
 
176 aa  44.3  0.0007  Sphingomonas wittichii RW1  Bacteria  normal  0.93204  normal  0.763516 
 
 
-
 
NC_007794  Saro_0539  2-chlorobenzoate 1,2-dioxygenase  25.69 
 
 
161 aa  44.3  0.0007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2897  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.6 
 
 
180 aa  43.1  0.001  Pseudomonas putida F1  Bacteria  normal  0.367264  normal  0.364758 
 
 
-
 
NC_012791  Vapar_1503  aromatic-ring-hydroxylating dioxygenase beta subunit  26.67 
 
 
155 aa  41.6  0.004  Variovorax paradoxus S110  Bacteria  normal  0.223026  n/a   
 
 
-
 
NC_009426  Saro_3834  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.87 
 
 
165 aa  40.4  0.01  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.3224  n/a   
 
 
-
 
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