50 homologs were found in PanDaTox collection
for query gene Msil_1469 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_1469  aromatic-ring-hydroxylating dioxygenase beta subunit  100 
 
 
158 aa  334  2.9999999999999997e-91  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009426  Saro_3860  aromatic-ring-hydroxylating dioxygenase, beta subunit  45.77 
 
 
162 aa  157  8e-38  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.705611  n/a   
 
 
-
 
NC_007951  Bxe_A1101  aromatic-ring-hydroxylating dioxygenase, beta subunit  42.58 
 
 
159 aa  145  3e-34  Burkholderia xenovorans LB400  Bacteria  normal  0.699365  normal 
 
 
-
 
NC_010515  Bcenmc03_3747  aromatic-ring-hydroxylating dioxygenase beta subunit  41.14 
 
 
158 aa  144  4.0000000000000006e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0585966  normal 
 
 
-
 
NC_010552  BamMC406_3668  aromatic-ring-hydroxylating dioxygenase beta subunit  41.29 
 
 
162 aa  144  6e-34  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.782299 
 
 
-
 
NC_008391  Bamb_5503  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.29 
 
 
162 aa  144  6e-34  Burkholderia ambifaria AMMD  Bacteria  normal  0.361492  normal 
 
 
-
 
NC_007953  Bxe_C1120  anthranilate dioxygenase, small subunit (AndAd)  44.52 
 
 
157 aa  143  8.000000000000001e-34  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2324  aromatic-ring-hydroxylating dioxygenase, beta subunit  40.65 
 
 
162 aa  143  1e-33  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1109  anthranilate dioxygenase, small subunit (AndAd)  43.45 
 
 
157 aa  141  3e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235119 
 
 
-
 
NC_008784  BMASAVP1_1379  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.94 
 
 
171 aa  141  4e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.309833  n/a   
 
 
-
 
NC_008835  BMA10229_1576  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.94 
 
 
171 aa  141  4e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  0.446034  n/a   
 
 
-
 
NC_009075  BURPS668_A2706  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.94 
 
 
171 aa  141  4e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2562  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.94 
 
 
171 aa  141  4e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0235  aromatic-ring-hydroxylating dioxygenase, beta subunit  41.94 
 
 
171 aa  141  4e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0982  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  41.94 
 
 
165 aa  141  4e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0204  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  41.94 
 
 
165 aa  141  4e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4587  aromatic-ring-hydroxylating dioxygenase, beta subunit  39.87 
 
 
158 aa  140  5e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.892698  n/a   
 
 
-
 
NC_008543  Bcen2424_3776  aromatic-ring-hydroxylating dioxygenase, beta subunit  39.87 
 
 
158 aa  140  5e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.408818 
 
 
-
 
NC_007650  BTH_II0489  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  41.29 
 
 
161 aa  140  6e-33  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4956  aromatic-ring-hydroxylating dioxygenase beta subunit  42.07 
 
 
162 aa  138  3e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.255127  normal 
 
 
-
 
NC_010524  Lcho_0796  aromatic-ring-hydroxylating dioxygenase beta subunit  37.82 
 
 
160 aa  134  4e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_0984  aromatic-ring-hydroxylating dioxygenase, beta subunit  38.46 
 
 
162 aa  134  7.000000000000001e-31  Polaromonas sp. JS666  Bacteria  normal  0.147739  hitchhiker  0.000202468 
 
 
-
 
NC_007348  Reut_B4720  aromatic-ring-hydroxylating dioxygenase, beta subunit  39.31 
 
 
156 aa  128  4.0000000000000003e-29  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2751  putative terephthalate 1,2-dioxygenase, small subunit (TphA2)  38.51 
 
 
156 aa  127  7.000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_3867  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.05 
 
 
163 aa  126  1.0000000000000001e-28  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.996924  n/a   
 
 
-
 
NC_008752  Aave_0166  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.97 
 
 
162 aa  125  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.000302415 
 
 
-
 
NC_008781  Pnap_2487  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.5 
 
 
161 aa  124  6e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.697863  normal 
 
 
-
 
NC_003295  RSc1089  putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein  34.39 
 
 
157 aa  123  1e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.333819  normal 
 
 
-
 
NC_012792  Vapar_5348  aromatic-ring-hydroxylating dioxygenase beta subunit  33.79 
 
 
156 aa  119  1.9999999999999998e-26  Variovorax paradoxus S110  Bacteria  normal  0.0824141  n/a   
 
 
-
 
NC_007951  Bxe_A1108  ortho-halobenzoate-1,2-dioxygenase, beta subunit  37.33 
 
 
176 aa  115  1.9999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3057  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.75 
 
 
158 aa  114  6e-25  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0219432 
 
 
-
 
NC_007952  Bxe_B2347  putative aromatic dioxygenase, beta subunit  30.38 
 
 
167 aa  108  3e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0942  putative ring dioxygenase beta subunit  27.27 
 
 
160 aa  97.4  6e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2670  aromatic-ring-hydroxylating dioxygenase beta subunit  30.38 
 
 
162 aa  95.1  3e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.445866  normal 
 
 
-
 
NC_008786  Veis_4604  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.77 
 
 
158 aa  91.3  4e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3712  salicylate 5-hydroxylase (oxygenase small subunit)  32.24 
 
 
158 aa  90.9  6e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0366284 
 
 
-
 
NC_007348  Reut_B3775  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.39 
 
 
174 aa  87.4  6e-17  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4291  aromatic-ring-hydroxylating dioxygenase beta subunit  29.08 
 
 
171 aa  85.9  2e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2462  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.33 
 
 
109 aa  79.7  0.00000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.200723  normal 
 
 
-
 
NC_009511  Swit_0895  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.22 
 
 
166 aa  69.3  0.00000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.237338  normal  0.228305 
 
 
-
 
NC_009426  Saro_3834  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.34 
 
 
165 aa  59.7  0.00000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.3224  n/a   
 
 
-
 
NC_008703  Mkms_5631  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  56.2  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2232  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  57  0.0000001  Mycobacterium sp. JLS  Bacteria  normal  0.201488  normal 
 
 
-
 
NC_008726  Mvan_0493  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  55.5  0.0000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.332253  normal 
 
 
-
 
NC_008146  Mmcs_1647  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  54.7  0.0000005  Mycobacterium sp. MCS  Bacteria  normal  0.416778  n/a   
 
 
-
 
NC_009338  Mflv_0657  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  54.7  0.0000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0562  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  54.7  0.0000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1673  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  54.7  0.0000005  Mycobacterium sp. KMS  Bacteria  normal  0.665274  normal 
 
 
-
 
NC_009077  Mjls_1622  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.36 
 
 
165 aa  54.7  0.0000005  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2897  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.19 
 
 
180 aa  42.4  0.003  Pseudomonas putida F1  Bacteria  normal  0.367264  normal  0.364758 
 
 
-
 
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