Gene BamMC406_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3668 
Symbol 
ID6179145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp624399 
End bp624887 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID641683438 
Productaromatic-ring-hydroxylating dioxygenase beta subunit 
Protein accessionYP_001810351 
Protein GI172062700 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.782299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA ACCTGACGGA AGACATGAAG ACGTGGTTCG AGATTTACAT GCTCCAGAAC 
CGCTACATCG GCCACCTCGA CAACGACCGG CTCGAACACT GGCCGGAAAT GTTCACCGAG
GATTGCACGT ACGAGATCGT GCCGAAGGAG AACGCGGATC TCGGGCTGCC GGTCGGGATC
GTCCACTGCA CGAACCAGCG GATGCTGCGC GATCGCGTGG TGTCGCTGCG GCACGCGAAC
ATCTATGAAG AGCACACGTA CCGGCACATG ACGTCGGGTC TCACGATCGT CGCGCAGCGC
GACGGCGAGA TCGACACCGA GAGCAACTAC GTGGTCGTGC AGACGCGCAG CAACGGCGAA
TCGAATGTGT ACCAGGCCGG CAAGTACTAC GACACGGTCG TGCGCACGCC CGACGGGCTG
CGCTACAAGA CCAAGCGCGT GATCTACGAC ACGTCGCGCG TGCAGACGCT GCTCGCGACG
CCGATCTGA
 
Protein sequence
MMENLTEDMK TWFEIYMLQN RYIGHLDNDR LEHWPEMFTE DCTYEIVPKE NADLGLPVGI 
VHCTNQRMLR DRVVSLRHAN IYEEHTYRHM TSGLTIVAQR DGEIDTESNY VVVQTRSNGE
SNVYQAGKYY DTVVRTPDGL RYKTKRVIYD TSRVQTLLAT PI