| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5348 |
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| Symbol | |
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| ID | 7975809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 52397 |
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| End bp | 52867 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795942 |
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| Product | aromatic-ring-hydroxylating dioxygenase beta subunit |
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| Protein accession | YP_002947216 |
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| Protein GI | 239820031 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0824141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCC AGGACTACTT CGAGCTGACC CAGCTCTACG CCCGCTACGC CCAGGCCGTG
AGCTCCGGCC AATGGGAACT CTGGCCGGAA TTCTTCACGG AGGACTGCAG CTACCGGCTG
CAGCCGCGCG AGAACCACGA ACGCGGCTTT CCGCTGGCCA CGCTCTCGTT CGAGAGCAAG
GGCATGCTGA AGGACCGCGT CTACGGCATC CGCGAGACCC TGTTCCACGA CCCCTACTAC
CAGCGCCACG TGGTCGGAAC GCCGCTCGTG CTGAAGGCCG AGGCGGACCG CTTCGAGTGC
GAGGCCAACT ACGCGGTGTT CCGCACCAAG CTCTCGGAAC TCTCGAGCGC GTTCAACGTG
GGCCGCTACA TCGATGTGGT CGTGCGCACC GCCGAGGGAC TGAAGTTCGC CTCGCGCCAA
GTCATCTACG ACAGCGAAAT GATCCCCAAC TCCGTCATCT ATCCCCTCTG A
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| Protein sequence | MNFQDYFELT QLYARYAQAV SSGQWELWPE FFTEDCSYRL QPRENHERGF PLATLSFESK
GMLKDRVYGI RETLFHDPYY QRHVVGTPLV LKAEADRFEC EANYAVFRTK LSELSSAFNV
GRYIDVVVRT AEGLKFASRQ VIYDSEMIPN SVIYPL
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