Gene Pnap_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2462 
Symbol 
ID4689306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2603406 
End bp2603735 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content52% 
IMG OID639835472 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_982689 
Protein GI121605360 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.200723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCCTGC TGGCATTGGA GAGCAAGAAC ATGATTCGCG ACCGGGTGTA TGGCGTCAAG 
GAGACTTTGT ACCACGACCC CTATTACCAG CGTCACATCG TAGGTACCCC TCGCGTGGTG
TCCGTGGAGC GCAACATCTA TGGCGAGCGC ATCACCTCGG AGGCCAATTA CACGGTTATC
AGGACCAAAT ATGACGGGGA TTCGACGGTA TTCAACGTTG GCTATTACCG CGATCTGATC
GTGAGAACGC CTGAAGGGTT GAAGTTTCAG TCGCGTCTTT GCGTCTACGA CAGTGAAATG
ATCGCCAATT CCATCATCTA TCCAATTTAA
 
Protein sequence
MCLLALESKN MIRDRVYGVK ETLYHDPYYQ RHIVGTPRVV SVERNIYGER ITSEANYTVI 
RTKYDGDSTV FNVGYYRDLI VRTPEGLKFQ SRLCVYDSEM IANSIIYPI