Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0984 |
Symbol | |
ID | 4010928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1002466 |
End bp | 1002954 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637940663 |
Product | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Protein accession | YP_547836 |
Protein GI | 91786884 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.147739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000202468 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCACCG CTGTCGACAT CAATTTTGAA GACTACCTGC AGGTCGCGCA GCTGTATGCC GATTACGCTC GGGCGGTCGA TTCGGGCGAC TGGGATTTGT GGCCCGAGTT CTTCACCGAA AACTGCACCT ACAAGCTGAT CCCGCGTGAA AACCATGAAC GCGGCTTTCC GCTGGCCACC CTGTTTTTTG AAAGCAAGGG CATGCTGAAA GACCGCGTCT ATGGCATCCG CGAGACGCTG TTCCATGACC CTTACTACCA GCGCCACGTC GTCGGCGCGC CGCTGATCCA CAAGGCCGAC AAGAACCGTT TCGAGGCCGA GGCCAACTAC GCCGTTTTCC GCACCAAGCT GTCGCAGGAG TCGACCGTCT TCAACGTCGG CCGCTACATC GACGTGATCG AGCGCACGCC CGAAGGCCTG AAGTTCGCGT CACGCCTCTG CGTGTACGAC AGCGAAATGA TCCCGAATTC CATCATCTAC CCGATTTAA
|
Protein sequence | MSTAVDINFE DYLQVAQLYA DYARAVDSGD WDLWPEFFTE NCTYKLIPRE NHERGFPLAT LFFESKGMLK DRVYGIRETL FHDPYYQRHV VGAPLIHKAD KNRFEAEANY AVFRTKLSQE STVFNVGRYI DVIERTPEGL KFASRLCVYD SEMIPNSIIY PI
|
| |