50 homologs were found in PanDaTox collection
for query gene Swit_3057 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_3057  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
158 aa  325  1.0000000000000001e-88  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0219432 
 
 
-
 
NC_010524  Lcho_0796  aromatic-ring-hydroxylating dioxygenase beta subunit  54.14 
 
 
160 aa  194  4.0000000000000005e-49  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_0166  aromatic-ring-hydroxylating dioxygenase, beta subunit  58.33 
 
 
162 aa  191  4e-48  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.000302415 
 
 
-
 
NC_007948  Bpro_0984  aromatic-ring-hydroxylating dioxygenase, beta subunit  56.38 
 
 
162 aa  186  9e-47  Polaromonas sp. JS666  Bacteria  normal  0.147739  hitchhiker  0.000202468 
 
 
-
 
NC_003295  RSc1089  putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein  56.38 
 
 
157 aa  184  4e-46  Ralstonia solanacearum GMI1000  Bacteria  normal  0.333819  normal 
 
 
-
 
NC_007348  Reut_B4720  aromatic-ring-hydroxylating dioxygenase, beta subunit  53.38 
 
 
156 aa  184  4e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5348  aromatic-ring-hydroxylating dioxygenase beta subunit  56.38 
 
 
156 aa  183  1.0000000000000001e-45  Variovorax paradoxus S110  Bacteria  normal  0.0824141  n/a   
 
 
-
 
NC_008781  Pnap_2487  aromatic-ring-hydroxylating dioxygenase, beta subunit  53.59 
 
 
161 aa  162  2.0000000000000002e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.697863  normal 
 
 
-
 
NC_009654  Mmwyl1_2670  aromatic-ring-hydroxylating dioxygenase beta subunit  43.31 
 
 
162 aa  155  2e-37  Marinomonas sp. MWYL1  Bacteria  normal  0.445866  normal 
 
 
-
 
NC_008781  Pnap_2462  aromatic-ring-hydroxylating dioxygenase, beta subunit  53.21 
 
 
109 aa  117  4.9999999999999996e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.200723  normal 
 
 
-
 
NC_011666  Msil_1469  aromatic-ring-hydroxylating dioxygenase beta subunit  29.75 
 
 
158 aa  114  6e-25  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009426  Saro_3860  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.28 
 
 
162 aa  111  4.0000000000000004e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.705611  n/a   
 
 
-
 
NC_007348  Reut_B3775  aromatic-ring-hydroxylating dioxygenase, beta subunit  32 
 
 
174 aa  105  3e-22  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C1120  anthranilate dioxygenase, small subunit (AndAd)  34.67 
 
 
157 aa  102  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1109  anthranilate dioxygenase, small subunit (AndAd)  34.67 
 
 
157 aa  100  7e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235119 
 
 
-
 
NC_008391  Bamb_5503  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.42 
 
 
162 aa  100  8e-21  Burkholderia ambifaria AMMD  Bacteria  normal  0.361492  normal 
 
 
-
 
NC_010552  BamMC406_3668  aromatic-ring-hydroxylating dioxygenase beta subunit  34.42 
 
 
162 aa  100  8e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.782299 
 
 
-
 
NC_007511  Bcep18194_B2324  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.42 
 
 
162 aa  99.8  1e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3747  aromatic-ring-hydroxylating dioxygenase beta subunit  34.42 
 
 
158 aa  100  1e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0585966  normal 
 
 
-
 
NC_009426  Saro_3867  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.01 
 
 
163 aa  100  1e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.996924  n/a   
 
 
-
 
NC_007951  Bxe_A1108  ortho-halobenzoate-1,2-dioxygenase, beta subunit  34.9 
 
 
176 aa  99.4  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4587  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.77 
 
 
158 aa  97.4  6e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.892698  n/a   
 
 
-
 
NC_008543  Bcen2424_3776  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.77 
 
 
158 aa  97.4  6e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.408818 
 
 
-
 
NC_007952  Bxe_B2347  putative aromatic dioxygenase, beta subunit  36.73 
 
 
167 aa  97.4  6e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3712  salicylate 5-hydroxylase (oxygenase small subunit)  32.68 
 
 
158 aa  96.3  1e-19  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0366284 
 
 
-
 
NC_010086  Bmul_4956  aromatic-ring-hydroxylating dioxygenase beta subunit  34 
 
 
162 aa  96.3  1e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.255127  normal 
 
 
-
 
NC_007953  Bxe_C0942  putative ring dioxygenase beta subunit  31.13 
 
 
160 aa  94.7  4e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_1379  aromatic-ring-hydroxylating dioxygenase, beta subunit  34 
 
 
171 aa  90.5  7e-18  Burkholderia mallei SAVP1  Bacteria  normal  0.309833  n/a   
 
 
-
 
NC_009079  BMA10247_A0235  aromatic-ring-hydroxylating dioxygenase, beta subunit  34 
 
 
171 aa  90.5  7e-18  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1576  aromatic-ring-hydroxylating dioxygenase, beta subunit  34 
 
 
171 aa  90.5  7e-18  Burkholderia mallei NCTC 10229  Bacteria  normal  0.446034  n/a   
 
 
-
 
NC_009075  BURPS668_A2706  aromatic-ring-hydroxylating dioxygenase, beta subunit  34 
 
 
171 aa  90.5  8e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2562  aromatic-ring-hydroxylating dioxygenase, beta subunit  34 
 
 
171 aa  90.5  8e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0204  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  34 
 
 
165 aa  90.5  9e-18  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0982  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  34 
 
 
165 aa  90.5  9e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0489  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  33.33 
 
 
161 aa  88.6  3e-17  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4291  aromatic-ring-hydroxylating dioxygenase beta subunit  26 
 
 
171 aa  79.7  0.00000000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4604  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.87 
 
 
158 aa  78.6  0.00000000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1101  aromatic-ring-hydroxylating dioxygenase, beta subunit  25.79 
 
 
159 aa  77.4  0.00000000000007  Burkholderia xenovorans LB400  Bacteria  normal  0.699365  normal 
 
 
-
 
NC_007952  Bxe_B2751  putative terephthalate 1,2-dioxygenase, small subunit (TphA2)  29.37 
 
 
156 aa  75.1  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0895  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.77 
 
 
166 aa  60.5  0.00000001  Sphingomonas wittichii RW1  Bacteria  normal  0.237338  normal  0.228305 
 
 
-
 
NC_008703  Mkms_5631  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.05 
 
 
165 aa  53.5  0.000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2232  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.05 
 
 
165 aa  52.8  0.000002  Mycobacterium sp. JLS  Bacteria  normal  0.201488  normal 
 
 
-
 
NC_008726  Mvan_0493  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.38 
 
 
165 aa  50.8  0.000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.332253  normal 
 
 
-
 
NC_008705  Mkms_1673  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.38 
 
 
165 aa  50.4  0.00001  Mycobacterium sp. KMS  Bacteria  normal  0.665274  normal 
 
 
-
 
NC_008146  Mmcs_1647  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.38 
 
 
165 aa  50.4  0.00001  Mycobacterium sp. MCS  Bacteria  normal  0.416778  n/a   
 
 
-
 
NC_009077  Mjls_1622  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.38 
 
 
165 aa  50.4  0.00001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0657  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.7 
 
 
165 aa  49.3  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0562  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.7 
 
 
165 aa  49.3  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1681  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.13 
 
 
166 aa  42.7  0.002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3245  3-phenylpropionate dioxygenase subunit beta  26.67 
 
 
178 aa  41.2  0.006  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00000856848  normal 
 
 
-
 
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