49 homologs were found in PanDaTox collection
for query gene Pnap_2487 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_2487  aromatic-ring-hydroxylating dioxygenase, beta subunit  100 
 
 
161 aa  335  1.9999999999999998e-91  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.697863  normal 
 
 
-
 
NC_008781  Pnap_2462  aromatic-ring-hydroxylating dioxygenase, beta subunit  95.41 
 
 
109 aa  218  3e-56  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.200723  normal 
 
 
-
 
NC_012792  Vapar_5348  aromatic-ring-hydroxylating dioxygenase beta subunit  60.62 
 
 
156 aa  207  4e-53  Variovorax paradoxus S110  Bacteria  normal  0.0824141  n/a   
 
 
-
 
NC_007948  Bpro_0984  aromatic-ring-hydroxylating dioxygenase, beta subunit  59.38 
 
 
162 aa  207  6e-53  Polaromonas sp. JS666  Bacteria  normal  0.147739  hitchhiker  0.000202468 
 
 
-
 
NC_007348  Reut_B4720  aromatic-ring-hydroxylating dioxygenase, beta subunit  57.5 
 
 
156 aa  204  4e-52  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0166  aromatic-ring-hydroxylating dioxygenase, beta subunit  58.39 
 
 
162 aa  202  1e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.000302415 
 
 
-
 
NC_003295  RSc1089  putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein  57.14 
 
 
157 aa  202  2e-51  Ralstonia solanacearum GMI1000  Bacteria  normal  0.333819  normal 
 
 
-
 
NC_010524  Lcho_0796  aromatic-ring-hydroxylating dioxygenase beta subunit  56.25 
 
 
160 aa  196  1.0000000000000001e-49  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_2670  aromatic-ring-hydroxylating dioxygenase beta subunit  47.2 
 
 
162 aa  166  2e-40  Marinomonas sp. MWYL1  Bacteria  normal  0.445866  normal 
 
 
-
 
NC_009511  Swit_3057  aromatic-ring-hydroxylating dioxygenase, beta subunit  53.59 
 
 
158 aa  162  2.0000000000000002e-39  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0219432 
 
 
-
 
NC_011666  Msil_1469  aromatic-ring-hydroxylating dioxygenase beta subunit  32.5 
 
 
158 aa  124  6e-28  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010515  Bcenmc03_3747  aromatic-ring-hydroxylating dioxygenase beta subunit  37.11 
 
 
158 aa  116  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0585966  normal 
 
 
-
 
NC_010552  BamMC406_3668  aromatic-ring-hydroxylating dioxygenase beta subunit  36.48 
 
 
162 aa  115  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.782299 
 
 
-
 
NC_008391  Bamb_5503  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.48 
 
 
162 aa  115  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.361492  normal 
 
 
-
 
NC_007511  Bcep18194_B2324  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.48 
 
 
162 aa  115  3.9999999999999997e-25  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4587  aromatic-ring-hydroxylating dioxygenase, beta subunit  35.85 
 
 
158 aa  112  2.0000000000000002e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.892698  n/a   
 
 
-
 
NC_008543  Bcen2424_3776  aromatic-ring-hydroxylating dioxygenase, beta subunit  35.85 
 
 
158 aa  112  2.0000000000000002e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.408818 
 
 
-
 
NC_010086  Bmul_4956  aromatic-ring-hydroxylating dioxygenase beta subunit  35.22 
 
 
162 aa  112  3e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.255127  normal 
 
 
-
 
NC_007953  Bxe_C1120  anthranilate dioxygenase, small subunit (AndAd)  34.78 
 
 
157 aa  107  5e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1109  anthranilate dioxygenase, small subunit (AndAd)  33.54 
 
 
157 aa  107  9.000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.235119 
 
 
-
 
NC_007348  Reut_B3775  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.42 
 
 
174 aa  107  9.000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1379  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.96 
 
 
171 aa  103  1e-21  Burkholderia mallei SAVP1  Bacteria  normal  0.309833  n/a   
 
 
-
 
NC_008835  BMA10229_1576  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.96 
 
 
171 aa  103  1e-21  Burkholderia mallei NCTC 10229  Bacteria  normal  0.446034  n/a   
 
 
-
 
NC_009075  BURPS668_A2706  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.96 
 
 
171 aa  103  1e-21  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2562  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.96 
 
 
171 aa  103  1e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0235  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.96 
 
 
171 aa  103  1e-21  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3860  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.41 
 
 
162 aa  103  1e-21  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.705611  n/a   
 
 
-
 
NC_006349  BMAA0204  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  33.96 
 
 
165 aa  103  1e-21  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0982  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  33.96 
 
 
165 aa  103  1e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0489  ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA  34.59 
 
 
161 aa  103  1e-21  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3712  salicylate 5-hydroxylase (oxygenase small subunit)  35.48 
 
 
158 aa  101  4e-21  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0366284 
 
 
-
 
NC_007953  Bxe_C0942  putative ring dioxygenase beta subunit  34.21 
 
 
160 aa  96.7  1e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4291  aromatic-ring-hydroxylating dioxygenase beta subunit  30.72 
 
 
171 aa  93.2  1e-18  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1108  ortho-halobenzoate-1,2-dioxygenase, beta subunit  29.22 
 
 
176 aa  89.7  1e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1101  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.04 
 
 
159 aa  88.2  4e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.699365  normal 
 
 
-
 
NC_007952  Bxe_B2347  putative aromatic dioxygenase, beta subunit  32.19 
 
 
167 aa  87.4  7e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_3867  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.12 
 
 
163 aa  84  9e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.996924  n/a   
 
 
-
 
NC_008786  Veis_4604  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.11 
 
 
158 aa  82  0.000000000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2751  putative terephthalate 1,2-dioxygenase, small subunit (TphA2)  28.38 
 
 
156 aa  80.5  0.00000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2232  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.15 
 
 
165 aa  58.5  0.00000003  Mycobacterium sp. JLS  Bacteria  normal  0.201488  normal 
 
 
-
 
NC_008726  Mvan_0493  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.15 
 
 
165 aa  57.4  0.00000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.332253  normal 
 
 
-
 
NC_008703  Mkms_5631  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.15 
 
 
165 aa  57.4  0.00000009  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1647  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.97 
 
 
165 aa  57  0.0000001  Mycobacterium sp. MCS  Bacteria  normal  0.416778  n/a   
 
 
-
 
NC_008705  Mkms_1673  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.97 
 
 
165 aa  57  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  0.665274  normal 
 
 
-
 
NC_009077  Mjls_1622  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.97 
 
 
165 aa  57  0.0000001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0657  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.49 
 
 
165 aa  55.8  0.0000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0562  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.49 
 
 
165 aa  55.8  0.0000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0895  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.14 
 
 
166 aa  55.8  0.0000003  Sphingomonas wittichii RW1  Bacteria  normal  0.237338  normal  0.228305 
 
 
-
 
NC_009511  Swit_0889  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.35 
 
 
176 aa  42.4  0.003  Sphingomonas wittichii RW1  Bacteria  normal  0.93204  normal  0.763516 
 
 
-
 
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