| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0942 |
|---|
| Symbol | |
|---|
| ID | 4010455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 977492 |
|---|
| End bp | 977974 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637953547 |
|---|
| Product | putative ring dioxygenase beta subunit |
|---|
| Protein accession | YP_556167 |
|---|
| Protein GI | 91780960 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC GAGAGAACGA CGATTTGATG CGGGAGTTGC GCGATTTCTA TGAGGATTAC
AGCACGTGCC TGGATAGCAA TGATTTTGAG CGCTGGCCCT CGTTTTTCCT GGACGACGCA
CGGTACCGGA TCATTTCTCG CGAGGACTTC ACCCGCGGAC TTCCGCTTGG CGCGATGACC
TGTGAAGGCG TCGGCATGAT CCACGACCGT GTCACCGCGC TGGTGAAGGT ACTGGTCTAC
GAGCCGCGCG TCTGGCGCCG CTTTGTCAGT TCGATCCAGT TGTTGTCGAG TAAGGGCGGG
GTAATCGAAT CACGCGCCAA TTTCCTGCTG TACGAATCGC TGATGGATCG GGAGCCACGC
GTCAACATGC TCGGTCAGTA CGTCGACACG CTCGTCCACG CCAATGGCTC TTTCAAGATC
AAGTCGCGCG ATTGCGTCTA CGATAATTAC CGTATCCATA CCACGCTCTA TGCACCGGCT
TGA
|
|---|
| Protein sequence | MQTRENDDLM RELRDFYEDY STCLDSNDFE RWPSFFLDDA RYRIISREDF TRGLPLGAMT
CEGVGMIHDR VTALVKVLVY EPRVWRRFVS SIQLLSSKGG VIESRANFLL YESLMDREPR
VNMLGQYVDT LVHANGSFKI KSRDCVYDNY RIHTTLYAPA
|
|---|
| |