44 homologs were found in PanDaTox collection
for query gene Rfer_4140 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 374 aa  741    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  60.34 
 
 		 360 aa  446  1.0000000000000001e-124  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  68.75 
 
 		 356 aa  399  9.999999999999999e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  61.85 
 
 		 362 aa  397  1e-109  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  61.85 
 
 		 362 aa  397  1e-109  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  57.31 
 
 		 357 aa  386  1e-106  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  57.35 
 
 		 357 aa  382  1e-105  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  69.93 
 
 		 292 aa  338  7e-92  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  53.6 
 
 		 387 aa  323  3e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  55.66 
 
 		 387 aa  321  9.999999999999999e-87  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  54.75 
 
 		 387 aa  319  5e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  42.57 
 
 		 351 aa  254  2.0000000000000002e-66  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  36.95 
 
 		 352 aa  194  3e-48  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  34.41 
 
 		 351 aa  166  5.9999999999999996e-40  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  34 
 
 		 367 aa  149  1.0000000000000001e-34  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3702  C4-dicarboxylate transporter/malic acid transport protein  33.33 
 
 		 348 aa  145  1e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0322958  normal  0.371988 
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  32.46 
 
 		 357 aa  129  1.0000000000000001e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  40.13 
 
 		 197 aa  113  5e-24  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.150878 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  27.16 
 
 		 387 aa  76.6  0.0000000000007  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_013739  Cwoe_1488  respiratory nitrate reductase, gamma subunit  31.86 
 
 		 585 aa  72  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.269465 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  24.72 
 
 		 402 aa  69.3  0.0000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  24.43 
 
 		 385 aa  68.2  0.0000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  26.24 
 
 		 400 aa  64.3  0.000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  26.24 
 
 		 400 aa  64.3  0.000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  24.92 
 
 		 369 aa  62  0.00000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_3065  hypothetical protein  48.39 
 
 		 100 aa  61.6  0.00000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  25.5 
 
 		 346 aa  60.5  0.00000004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  19.53 
 
 		 343 aa  59.3  0.0000001  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013131  Caci_5803  C4-dicarboxylate transporter/malic acid transport protein  30.47 
 
 		 429 aa  58.2  0.0000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  23.55 
 
 		 381 aa  57.8  0.0000003  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  23.51 
 
 		 389 aa  56.2  0.000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  21.17 
 
 		 353 aa  55.1  0.000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  23.51 
 
 		 389 aa  54.7  0.000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  22.99 
 
 		 419 aa  53.1  0.000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  25.47 
 
 		 384 aa  51.6  0.00002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  23.84 
 
 		 383 aa  47.8  0.0003  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  24.93 
 
 		 404 aa  48.1  0.0003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  23.4 
 
 		 374 aa  47.8  0.0003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  24.16 
 
 		 429 aa  47  0.0005  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_008782  Ajs_3477  C4-dicarboxylate transporter/malic acid transport protein  55.77 
 
 		 56 aa  45.1  0.002  Acidovorax sp. JS42  Bacteria  normal  0.0482318  normal  0.24926 
 
 
-
 
NC_009565  TBFG_11753  hypothetical protein  37.14 
 
 		 80 aa  43.9  0.004  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.0879661 
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  24.27 
 
 		 386 aa  44.3  0.004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  27.64 
 
 		 395 aa  43.1  0.008  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  22.71 
 
 		 375 aa  43.1  0.008  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
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