17 homologs were found in PanDaTox collection
for query gene Noca_4059 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_4059  hypothetical protein  100 
 
 
587 aa  1149    Nocardioides sp. JS614  Bacteria  normal  0.360369  n/a   
 
 
-
 
NC_008699  Noca_4057  hypothetical protein  35.8 
 
 
910 aa  330  4e-89  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2527  protein of unknown function DUF1535  32.34 
 
 
904 aa  108  3e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.776522  n/a   
 
 
-
 
NC_008699  Noca_0373  hypothetical protein  28.09 
 
 
496 aa  97.1  9e-19  Nocardioides sp. JS614  Bacteria  normal  0.154623  n/a   
 
 
-
 
NC_013521  Sked_09170  hypothetical protein  31.54 
 
 
808 aa  86.7  0.000000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.887975  normal  0.329696 
 
 
-
 
NC_013739  Cwoe_3335  hypothetical protein  31.67 
 
 
577 aa  86.3  0.000000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.304879  normal  0.237472 
 
 
-
 
NC_011886  Achl_0719  hypothetical protein  29.84 
 
 
818 aa  85.1  0.000000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_3167  S-layer domain-containing protein  34.81 
 
 
637 aa  72.4  0.00000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2615  CHAP domain-containing protein  31.84 
 
 
560 aa  69.7  0.0000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4852  hypothetical protein  33.16 
 
 
316 aa  67.8  0.0000000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.0625952  normal 
 
 
-
 
NC_013739  Cwoe_4263  hypothetical protein  44.78 
 
 
848 aa  60.5  0.00000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.272775  normal  0.562756 
 
 
-
 
NC_013739  Cwoe_0364  fibro-slime family protein  46.48 
 
 
570 aa  54.3  0.000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.227511 
 
 
-
 
NC_007514  Cag_1920  hypothetical protein  20.56 
 
 
3834 aa  53.5  0.00001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0355  NHL repeat-containing protein  26.8 
 
 
1030 aa  52.8  0.00002  Roseiflexus sp. RS-1  Bacteria  normal  0.64892  normal  0.0641589 
 
 
-
 
NC_011988  Avi_6193  outer capsid protein Hoc  41.43 
 
 
228 aa  52.4  0.00003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1235  hypothetical protein  23.47 
 
 
2024 aa  45.8  0.002  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3560  hypothetical protein  32.02 
 
 
233 aa  45.4  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0428912  normal 
 
 
-
 
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