Gene Cag_1235 details

Gene Information

• Locus tag: Cag_1235
• ID: 3748268
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1636866
• End bp: 1642940
• Gene Length: 6075 bp
• Protein Length: 2024 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637773768
• Product: hypothetical protein
• Protein accession: YP_379539
• Protein GI: 78189201

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATAA TTCTTGCTGA TGCACTAATT GATGATGTTG CTTTGTTGCT AAGCTCATTA 
CCTGCTGCAA CAACATGTTA TTTACTTCAT GCTCAAGACG ATGCTGTAAA AGTTATACAA 
ACAGCATTTC AACAACCAAA TACTCATCTT CATTTTCTTG GGCATGGCGA AGAAGGTGCT 
ATTACACTTG GTGGTAAAAC ATTTACCGCT GATGATTTTA TAGCGCTGGC ACCTACTCAC 
AGCAGCAGTG GCGCTATCCA CTTTTGGTCA TGTAAAACAG GTGCTGGAAC TAAAGGTGTT 
GCCTTTGTTA ACTCCATTGC ACAAGCTTTT AACACGGTAG TAAGTGCATG TAGCACGCTT 
GTTGGGGCTG CCCATAAAGG GGGAAGCTGG AGACTTGATG TTCACTCAAA CGAAAGAGTT 
GCGGTTGCTT GTCCTTTTGG TAAAGCTGCC GCTTATCAGC ATACGCTTGA TGCTTCTTCT 
CTCCTAAGAG TGAATGCGGT TGCTCTTGAT AATGGACTTA AAGTAGAAAT TTGGATTGCT 
CCAAATACCG CCTTTAGCAC AGCAAGCCTT CGGCTTAGTT TTGATCCGTC CATTATTGCA 
CCTGTATGGG TAAATGGCAA AGTTGTTAGC ACAAGCGGCT TAACGGGATG GACGTGGCTT 
TCTTCACCAA TTGGTGATAC AGTCCTGAAG ATGAATGGTT ATACGCTCAC AGAGGTAAAC 
CGTACAACTG AGGTGCTTTT GCAATCTATC AGCTTTACCT TTGCGGCAGA TGTGCAGAAT 
TGTTCCATAT CGCTTGGTGG AACTTACTTG GAAAATGAAG TTACCGGTAA AATTGCGTTA 
GGCACATTGC CAACGTTAAC GTACATCGCG CCTGCTTTAC CTGTTTGGGA TACCTTTGCG 
CCACCAGAGG CGTTAAGTTA TACCGCAGGC ACAACTGCTG CACTTGATTT TGCCGTACAA 
GCTACCGATG CAAATGGCGA CACGATTACC TATAAAGCCG TTGTTGGACA AATGGTTGAA 
TCATTATTTA CACCAACCAC CTCGCTTTCA ACAATTACGC TAACATCATC GAATGGGCAT 
CTTACAGGAA GTGTAGTGTT GCCTCGTACT TTTTCGGCGG GAGTATATCT GTTTCGTTTA 
TATGCTGATG ATAAAACAAC AGACGCAAAT CTTGGTAGTG TTCTTGATGT TCCGTTTTCA 
CTGCTTGCTG CACCAAATGC GTTACCAACG GGCACCGTTA CCATTAGTGG CACACCAACG 
CAAAACCAGA CGCTCACCGC AGCTAACACC CTTGCTGATC TTGACGGAAT TGGCACCATC 
GCTTATCAAT GGAATGCCGA TGGAACGGCT ATCACAGGAG CTATTGGCAA TTCGCTTATG 
CTGACGGAAG CTCACGTTGG CAAGAAAATC ACCGTGACGG CGACTTATAC GGATAATCGT 
GGAACGCTGG AAAGTGTCGT CAGTACTGCA ACTTCAGCCG TTGTTAATAT AAACGATGCA 
CCAACGGGCA GCGTCTCCAT TAGTGGCACA CCTACGCAGG GACAGACGCT CACCGCAGCA 
AACACCCTTG CTGACCTTGA CGGACTTGGC ACAATTGCGT ATCAATGGAA TGCTGATGGA 
ACGGTTATCA CGGGCGCTAT CGGTAACAGC TTCACACTGA CGGAAACGCA CGTTGGTAAG 
AAAATCACCG TTACAGCAAC CTACACCGAT GGGCACGGCA CTACCGAGAG CGTTGTTAGT 
GCTGCTACGG TTGCCGTTGC TAACGTGAAC GACGTGCCAA CAGGCACCGT TACCATCAGT 
GGCAGTGCTA CGCAAAACCA GATGCTCATC GCAGCAAACA CGCTTGCTGA CCTTGATGGA 
CTTGGCACAA TCGCTTATCA ATGGAACGCT GATGGAACGG CTATCACGGG CGCTATCGGT 
AACAGCTTCA CACTGACGGA AACGCACGTT GGTAAGAAAA TCACCGTTAC AGCTACTTAT 
ACGGATAATC GTGGAACGCT GGAAAGTGTC GTCAGTACTG CAACTTCAGA CGTTGTTAAT 
ATAAACGATG CACCAACGGG AAGTATCTAC ATTACTGGAG CTGCAACAAA AGGACAAATT 
TTAACTGTCA ATACTGGTAC GCTTTCAGAT GCCGATGGAC TTAATGGTGA ATTTACTTAT 
CAATGGCAGG CTAATGAAAT TGATATAACA GGTGCAACGA GTAGTAGCTA TACGTTAACT 
AATGATGACG TAGGTAAAAA CATCCGAGTT GTTGCAAGCT ATACAGACAA TCATGGAACG 
AAGGAAAGTG TTGTTAGTAC TGCTACGGTT GCAGTTGCTA ACGTGAACGA TGTGCCAACG 
GGCGCCGTTA CCATCAGTGG CACACCTACG CAAAACCAGA CGCTCACCGC AGCAAACACC 
CTTGCTGACC TTGACGGACT TGGCACCATC GCTTATCAAT GGAATGCTGA TGGAACGACT 
ATCACGGGCG CTATCAGCAA TTCGCTTGTG CTTGGTGAAA CTCACGTTGG CAAGAAAATC 
ACCGTTACTG CAACCTACAC CGATGGGCAC AGCACCACCG AGAGCGTTGT TAGTGCACAG 
ACGACATCCG TTGCCAACGT GAACGATGCG CCAACAGGCA CCGTTACCAT CAGTGGCACA 
CCAACGCAAA ACCAGACGCT CACCGCAGCT AACACCCTTG CTGATCTTGA CGGAATTGGC 
ACCATCGCTT ATCAATGGAA TGCCGATGGA ACGGCTATCA CCGGTGTTAT TGGCGAAAAC 
CTCACGCTAA CGGAAGCTCT CGTTGGCAAG AAAATCACTG TTACAGCAAC CTACACCGAT 
GGGCACGGCA CTACCGAGAG CGTTGTTAGT ACTGCTACGG TTGCAGTTGC TAACGTGAAC 
GATGCGCCAA CAGGCACCGT TACCATCAAT GGCACACCTA CGCAGGAGCA GACGCTCACC 
GCAGCAAACA CCCTGGCTGA CCTTGATGGA CTTGGCACAA TTGCCTATCA ATGGAATGCC 
GATGGAACGG CTATCACGGG CGCTATCGGT AACAGCTTCA CGCTGACTGA AGCTCATGTT 
AGCAAGAAAA TCACTGTTAC AGCAATCTAC ACCGATGGGC ACGGCACTAC CGAGAGCGTT 
GTTAGTGCAG CAACAACAGC CGTTGCTAAC GTGAACGACA CTCCAACAGG CACCGTTACC 
ATCACCGACA GTGCTACGCA AAACCAGACG CTCACCGCAG CAAACACCCT TGCTGACCTT 
GACGGACTTG GCACCATCGA TTATCAATGG AATGCCGACG GAACGGCTAT CACCGGCGCT 
ATTGGCAATT CGCTTATGCT GACAGAAACG CACGTTGGTA AGAAAATCAC CGTTACAGCA 
ACCTACACCG ATGGGCACGG TACTACCGAG AGCGTTGTTA GTGCACAGAC GACATCCGTT 
GCCAACGTGA ACGATGCGCC GACGGGCACG GTTACTATCA CCGGTAGTGC TACGCAAGGG 
CAAACACTCA CGGCAAGCAA TACACTTGAA GACCTTGATG GTATGGGCAG CGTTGCGTAT 
CAATGGCAAG CAGATGGAAT GGCTATCAAT GGAGCTACGG GTAACAGCTT CACGCTGACT 
GAAGCTCATG TTAGCAAGAA AATCACTGTT ACAGCAATCT ACACCGATGG GCACGGCACT 
ACCGAGAACG TTGTCAGTGC GGCAACTTCA GCCGTTGTTA ATATAAACGA CACTCCGACA 
GGCACCGTTA CTATCACCGG CAGTGCTACG CAAAACCAGA CGCTAACCGC AGCTAACACC 
CTTGCTGATC TTGACGGAAT TGGCACCATC GCTTATCAAT GGAATGCTAA CGGAGTTGCA 
ATCACCGGTG CTGTTGGCGA CAATCTCACG CTTACGGAAG CACAGGTTGG TAAAAAAATC 
ACTGTTGTAG CAAGTTACAT TGATGGGCAC AGCACTACCG AGAACGTTGT CAGTGCACAG 
ACGACATCCG TTGCTAACGT TAACGATACA CCGACGGGCA CGGTTACCAT CACCGGTAGT 
GCTACACAAG GGCAAACACT CACGGCAAGC AATACGCTTG AAGATCTTGA TGGCATGGGC 
AGCGTTGCCT ATCAATGGAA TGCCGATGGA ACGGCTATAA CAGGTGCTAT TGGCAATTCG 
CTTATGCTGA CAGAAACGCA CGTTGGCAAG CAAATCACCG TTACAGCAAC TTACACCGAT 
GGGCACGGCA CCACCGAAAA CGTTGTTAGT GCACAAACAG CATCCGTTGC TAACGTGAAC 
GATGCGCCAA CGGGCACCGT TACCATTAGT GGCACACCTA CGCAAGGGCA GACGCTCACC 
GCAGCGAACA CTCTTGCCGA TGCTGACGGA CTTGGCACAA TTGCCTATCA ATGGAATGCC 
GATGGAACGG CTATTACCGG CGCTATCGGC AATTCGCTTG TGCTTGGTGA AACTCACGTT 
GGCAAGAAAA TCACCGTTAC AGCTACTTAT ACGGATGGGC ATGGTACTAC CGAAAGCGTT 
GTTAGTGCAC AGACGACATC CGTTGCTAAC GTTAACGATA CACCGACGGG CACGGTTACC 
ATCACCGGTA GTGCTACACA AGGGCAAACA CTCACGGCAA GCAATACGCT TGAAGATCTT 
GATGGCATGG GCAGCGTTGC GTATCAATGG AATGCTGATG GAACGGCTAT TACCGGCGCT 
ATCGGCAATT CGCTTGTGCT TAGTGAAACT CACGTTGGTA AAAAAATCAC TGTTGTAGCA 
AGTTACATTG ATGGGCACAG CACTACCGAG AGCGTTGTTA GTGCGGCTAC TGATATTATT 
TCTTTAGACG ACACCACCCC ACCCTACCTT ATATCAACAA CGCCAATTAA TAACAGTATT 
GGTATTTCAA CAAATAGCAA CATAACTCTC ACCTTTAGCG AAGCAATTAA TAAAGGTAAC 
GGCACAATTG CGCTCTATCT TAATTCGCCT ACAAAAACAT TAGTTGAAAA CTATAACGTT 
GCCGATAATG TTAATCTATC CATTGAAGGC AATAAGCTAA CCATAAATCC AACTGCCGAT 
CTTGAACAAG GTAAAAACTA TCTACTCGCT ATTGAGAATG GAGCTATAAC GGATAGTGCT 
AACAACCTAT TTGAAATAAC TGATGTATAT AATTTCACCA CTGAAACATT GCCAATAGAA 
CGTTACTCAT TATCGGGAAA TATCTCTTTT TGGAAAGATA AAGCTACACC ACTTCAAGAT 
GTTTCAATAG TTGCTACATC CGCAATGCAA ACACCAGACT TACTGGAATT TCGAAATATT 
CAACTGCATA GCGATGGTAG CCGTACCGTT GAGTTATGGA CAACCTCACC AAGCAACACG 
CTTCATGCTA TTCAAGTAGA ATTAGAGTTA CAAGAAGGCT CAACGGCTAC ATGGCAAAAT 
AGTACATCAA TTCCCTCAAA TTGGACAACA GTAACTCATG TTAATAATAA CGGGCACTTT 
GTACTGGGCA GCATGGGCAT AGAGCCTATT GCTATGGAAG CACCTACGGT TAAGCTTGGT 
GAATTAACCC TTAGTGCCCC CATAGACCAA GAGCGCTTTG AAATTGCTAT AGTTAATGGA 
TTAACAAATG AGCAAGCTAT CACTCCATTC GCACTAACTT CTTCAGAAAT AATAAGTAAC 
AAGCAAGGGC ACTATAGCTT TACTCATTTA ATGGAAAGCC TTTATTACTT AGAAGCAAAT 
AAAGCTGCCG ATGCGCTTGC CGATGCCGTT ACTATTGAGG ATGCTCGTGC GGCTTTAATG 
ATAGCGGTAG GACTTAATCC AAATAGTGAT GGCACACCTT TACTACCCTA TCAATATCTT 
GCGGCTGATG TTAATCGTGA TGGAAAAATT CGCGCCTCCG ATGCGCTAAC TATTTTAAAA 
ATGGCGATTG GTGTGGATTC GGTACCTGAG CATGCATGGA TTTTTGCCTC TGAGAGCATT 
GAGAGTGCCG AAATGGGACG CAGTGCTGTT GATTGGTCGC ATACGGTGCC AACCGTGTTA 
CTTAATCAAG AGAGTAACAC CATAGATTTT ATTGGAATTG TAAAAGGTGA TGTTGATGGT 
AGTGCGCTAA CGTAG 

 

Protein sequence

MNIILADALI DDVALLLSSL PAATTCYLLH AQDDAVKVIQ TAFQQPNTHL HFLGHGEEGA 
ITLGGKTFTA DDFIALAPTH SSSGAIHFWS CKTGAGTKGV AFVNSIAQAF NTVVSACSTL 
VGAAHKGGSW RLDVHSNERV AVACPFGKAA AYQHTLDASS LLRVNAVALD NGLKVEIWIA 
PNTAFSTASL RLSFDPSIIA PVWVNGKVVS TSGLTGWTWL SSPIGDTVLK MNGYTLTEVN 
RTTEVLLQSI SFTFAADVQN CSISLGGTYL ENEVTGKIAL GTLPTLTYIA PALPVWDTFA 
PPEALSYTAG TTAALDFAVQ ATDANGDTIT YKAVVGQMVE SLFTPTTSLS TITLTSSNGH 
LTGSVVLPRT FSAGVYLFRL YADDKTTDAN LGSVLDVPFS LLAAPNALPT GTVTISGTPT 
QNQTLTAANT LADLDGIGTI AYQWNADGTA ITGAIGNSLM LTEAHVGKKI TVTATYTDNR 
GTLESVVSTA TSAVVNINDA PTGSVSISGT PTQGQTLTAA NTLADLDGLG TIAYQWNADG 
TVITGAIGNS FTLTETHVGK KITVTATYTD GHGTTESVVS AATVAVANVN DVPTGTVTIS 
GSATQNQMLI AANTLADLDG LGTIAYQWNA DGTAITGAIG NSFTLTETHV GKKITVTATY 
TDNRGTLESV VSTATSDVVN INDAPTGSIY ITGAATKGQI LTVNTGTLSD ADGLNGEFTY 
QWQANEIDIT GATSSSYTLT NDDVGKNIRV VASYTDNHGT KESVVSTATV AVANVNDVPT 
GAVTISGTPT QNQTLTAANT LADLDGLGTI AYQWNADGTT ITGAISNSLV LGETHVGKKI 
TVTATYTDGH STTESVVSAQ TTSVANVNDA PTGTVTISGT PTQNQTLTAA NTLADLDGIG 
TIAYQWNADG TAITGVIGEN LTLTEALVGK KITVTATYTD GHGTTESVVS TATVAVANVN 
DAPTGTVTIN GTPTQEQTLT AANTLADLDG LGTIAYQWNA DGTAITGAIG NSFTLTEAHV 
SKKITVTAIY TDGHGTTESV VSAATTAVAN VNDTPTGTVT ITDSATQNQT LTAANTLADL 
DGLGTIDYQW NADGTAITGA IGNSLMLTET HVGKKITVTA TYTDGHGTTE SVVSAQTTSV 
ANVNDAPTGT VTITGSATQG QTLTASNTLE DLDGMGSVAY QWQADGMAIN GATGNSFTLT 
EAHVSKKITV TAIYTDGHGT TENVVSAATS AVVNINDTPT GTVTITGSAT QNQTLTAANT 
LADLDGIGTI AYQWNANGVA ITGAVGDNLT LTEAQVGKKI TVVASYIDGH STTENVVSAQ 
TTSVANVNDT PTGTVTITGS ATQGQTLTAS NTLEDLDGMG SVAYQWNADG TAITGAIGNS 
LMLTETHVGK QITVTATYTD GHGTTENVVS AQTASVANVN DAPTGTVTIS GTPTQGQTLT 
AANTLADADG LGTIAYQWNA DGTAITGAIG NSLVLGETHV GKKITVTATY TDGHGTTESV 
VSAQTTSVAN VNDTPTGTVT ITGSATQGQT LTASNTLEDL DGMGSVAYQW NADGTAITGA 
IGNSLVLSET HVGKKITVVA SYIDGHSTTE SVVSAATDII SLDDTTPPYL ISTTPINNSI 
GISTNSNITL TFSEAINKGN GTIALYLNSP TKTLVENYNV ADNVNLSIEG NKLTINPTAD 
LEQGKNYLLA IENGAITDSA NNLFEITDVY NFTTETLPIE RYSLSGNISF WKDKATPLQD 
VSIVATSAMQ TPDLLEFRNI QLHSDGSRTV ELWTTSPSNT LHAIQVELEL QEGSTATWQN 
STSIPSNWTT VTHVNNNGHF VLGSMGIEPI AMEAPTVKLG ELTLSAPIDQ ERFEIAIVNG 
LTNEQAITPF ALTSSEIISN KQGHYSFTHL MESLYYLEAN KAADALADAV TIEDARAALM 
IAVGLNPNSD GTPLLPYQYL AADVNRDGKI RASDALTILK MAIGVDSVPE HAWIFASESI 
ESAEMGRSAV DWSHTVPTVL LNQESNTIDF IGIVKGDVDG SALT