| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4059 |
|---|
| Symbol | |
|---|
| ID | 4596573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4283200 |
|---|
| End bp | 4284963 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639778665 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925243 |
|---|
| Protein GI | 119718278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.360369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGTCG GCGGCCTGGT CGCGCTGCCC GCCGGGCCCG CGGCCGCCGT CAGCACCGGC
CGGCCGATCG CGGTCGCCGC GGCCGACGAC GGGACGTCGT ACGTCGGCTA TGCCGCCGGC
CACCGGCTGC TCCGGCTCGA CGCCGCCGGC GGGGTGGCCG GCTCGGTGCC GCTGGACCAG
GACGCGCCCG TCACGGCCCT CGACGTGGGG CCCGACGGCA ACGTCTGGGT CCACTACGGC
GCCAGCGTGA GCGAGCTCGC GCCCGACGGC GCCGTCCGCA CCCACTTCCC GGTCGCCGGC
GGGGCGTGCC CGGTCGACCG GGCGCACGAC CCGGCGCGGT ACGGCGGCCT CGAGGTGACC
CGGGACGCGG TGTACGTCGC CGGTCGCTGT GCCGCCACGG TCGGCATCTA CCGCCCCGAC
GGCGAGCTGC TGGCGAGCGT CGACCTGCCG GGGCGGGCCT ACCCGGGCGA CGTCGTCCTC
GCCCCGGCGG CCAAGTCCCT GCCCGCGCGG ATGTACGTGT CGGTGCCGGA CGCCGGCCGG
GTCTACGCCT ACAACACCGC GAGCCTGCGC GCGGACCCGA AGCCCGCGCG GACGCTGGCG
ATCAAGCGGT TCTTCGGCTA TCGCTCGCCC GCACCCGGGC CGCTGGCCGC CGACGAGAAG
GGCCAGCTCG CCGTCGTGGA CGTCGCCAAC AACGCGGTGC ACTTCTACAA CGGCCCCGAG
GACTACTGGT ACTACCGCAC CCTCGGCCAC CCGCCCGACC CGGCGTCCGA CCGCGGGTTC
CTCGATCAGC CGACCGCGTT CGACAACGCG GACGGCAGCT TCCGCGACGG CTTCTGGGTC
GCCGACACCG GCAACGGGCG GGTGCAGCAC TGGGACCACC TCGGCACCAC CGACTGGATG
GCCGACGCGC TGCCGCCGGG CGACCCCGGC GCCCCGGTCA ACGTCGGGCT GCCGCGGATC
ACCGGATCGC CGTACGCCGG GCGGGTGCTC GACTGCGAGC CCGGGACGTG GGACGGCGCG
GTGGCGTCGT ACCGGCTGGC GTGGCTGCGC GACGGGCTGC CGGTCCCCGG CGCCGACGGC
GCCACGTACA CCGTCACCTC CCGTGACGTG GCGACCGCGC TGACCTGCAC CGTGACCGCC
GTGGCCGCGG ACGGCGCGAG CTCGGCGCCG AGCGCCAGCG AGGTGTTCGC GATCCCCGGC
CCGCACTCGC CGCCCTACGT CCTGGACCGT CCGGTGATCA GCGGCCAGCC CACCTCCGGT
GCCATCCTGC GGTGCGGCAA CGGGACCTGG ACCGGGCGAC CCACGTCGTA CCTCCGCGGC
TGGCTGCGCG ACGGCCAGCT CCTGCCCGGC ACGAACGCCC CGGAGTACCT CGTCACCGAC
AACGACCGCT ACCACGAGCT GACCTGCCGG GTCGCCGCGG TGAACCGGAA CGGCGCCGGC
AAGGTCGCGC TCAGCGACCC GGTCGCCGTC GACGACGGCA GCAGTGGTGG CCACGTCGGC
CCGCCGGTGA GCACCGCGCG GCCGCGGATC GTCGGCCGGG CCAAGGTCGG GGCGGTGCTG
TACTGCGACC CCGGGCGGTG GCGCAACGCG CCGGTGCTCA CCTACGTGTG GCGCCGCGAC
GGCGCCGCGC TCGGCGGCTC GGAGAAGGAC CGCTACGAGG TGCTCGGCGA CGACCGCGGG
CACCGGCTGA CCTGCCTGGT CACCGGCACC AACCCGGCCG GCTCGGACCG GGCGAGCTCC
GCGCCGGTGG TGCCCCGGGG CTGA
|
|---|
| Protein sequence | MVVGGLVALP AGPAAAVSTG RPIAVAAADD GTSYVGYAAG HRLLRLDAAG GVAGSVPLDQ
DAPVTALDVG PDGNVWVHYG ASVSELAPDG AVRTHFPVAG GACPVDRAHD PARYGGLEVT
RDAVYVAGRC AATVGIYRPD GELLASVDLP GRAYPGDVVL APAAKSLPAR MYVSVPDAGR
VYAYNTASLR ADPKPARTLA IKRFFGYRSP APGPLAADEK GQLAVVDVAN NAVHFYNGPE
DYWYYRTLGH PPDPASDRGF LDQPTAFDNA DGSFRDGFWV ADTGNGRVQH WDHLGTTDWM
ADALPPGDPG APVNVGLPRI TGSPYAGRVL DCEPGTWDGA VASYRLAWLR DGLPVPGADG
ATYTVTSRDV ATALTCTVTA VAADGASSAP SASEVFAIPG PHSPPYVLDR PVISGQPTSG
AILRCGNGTW TGRPTSYLRG WLRDGQLLPG TNAPEYLVTD NDRYHELTCR VAAVNRNGAG
KVALSDPVAV DDGSSGGHVG PPVSTARPRI VGRAKVGAVL YCDPGRWRNA PVLTYVWRRD
GAALGGSEKD RYEVLGDDRG HRLTCLVTGT NPAGSDRASS APVVPRG
|
|---|
| |