| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0355 |
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| Symbol | |
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| ID | 5207290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 454020 |
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| End bp | 457112 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640593981 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001274737 |
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| Protein GI | 148654532 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.64892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0641589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA ACAGCCTGCG CGTCATCACA CTCCTCGCTA TCTCAATCCT GCTACTGAGC
GGGCTGGCGA CGGCCCAGGG GCCGCAACCA CCGCTCCCCT CGTATCCACC CCAGGGACTG
GGCCTGCCCG CAGAAGCCCG GCTCGGGACG CCGGAGTTCG GCAAGCCCTT CATTCGCCCA
GGCGTTCCGA GCATTGGCAT CCAGAGCGCC GGGACCGCCT CCATCCCCCT CGGCCAGCCG
GGGCTGAGCT TCCGCTACGT GCAGACGTTC GGGGTGACGG AGACTCCCTA CATCTCAACC
ACTACCCACT TGAACTACCC TTACGGCATT GGGGTGGAGG GCAACAGCAT CTGGATTGGC
GAAATGTGGG GAAACCGTTT CCTCAAATAT GCCAGCGATG GCAATTTTCA ACAATCCTTT
GGCCATGCTG GCTTTGCTGA GGATTACACC GATACATCGT TTTGGGAAAT TGCTGACGTG
GCCACTGATA GCGACGGTAA CATCTGGGTA GTGGACGCGG CCTCCAGCCG GGTGGTCAAA
TTGAACTCCT CTGGCAAAGC ACTCCTAACA CTTGGAAAGC GGTGGGAAAG TGGAAGCGAC
AATAACCGAT TTGCATATCC CATCAGCGTT GCCTTTGACG CCAGCGGAAA CATCTACGTG
AGCGATGGCG CTCCCTGGTG GAACCGAGAG GGTGGGAACC ACCGCATCCA GGTTTTCCGG
AGTGATGGCA CCTATCTCGC TACGCTCGGG CAGACCGGCG TGTGTGGCTC TGCCAACAAC
CAATTCTGTG GGCCGCGCCA TATCGCCATC TACGGCAACG AACTCTATGT GCCCGATGCC
AACAACAACC GCGTGCAAAT CTTCAATATC TCCAATCCTG CGTCACCATC CTATGTGGCA
ACGATCGGGG GGCTGAACAA CCCTTCCGGC GTGGCGGTAG ACGATAACTT CATTTACATA
GCTGATACCT GGAATAACCG CATACAGACA TACACACGCA TAGATCGGGT GTATATCGGC
ACTATTGGAG GTGAATGGGG AAGTGGAAAC AACCAGTTCC GAAATCCAAC CGATGTTGTC
GCCATGACGA TTGGGACGTA TCCTAACGCG GAGCTTCATC TCTTCGTTGC AGACTTTGTC
AACACTCGCG TACAGCAATT CAAGATTACC AGCATTTCCC CCTTCGCTTT CCAGTATGTG
CGCACTTATG GAACAACTGG CGTGCCCTAT GTCACTGACG GTTATCATTA TAACACTCCG
TCAAGTGTTG CCGTGGCCCC TGATGGGAGC ATCTATCTGA CTGAGGATAA AGGCCATCGG
TTGGTCAAAC TTCGCCCTGA CGGTACACCC ATCTGGATTG TAGGTGCGGC TGGAGTGAAA
GGCGATTGGG ATGCCAGCAA CGATCGCTTG AATAATCCAG ACGACCTTGC GCTTGATGCG
AATGGGCGGG TCTATGTTGC TGACCGCTGG CATGGCCGGG TGCAGATTTA CAACCCAGAC
GGCTCATACT ACACCACGGT GAGCGGCTTG GACTGCCCGG GCGGGGTGGC CATTGGCCCC
AACGGATACC TCTATGTGGC CGATACTTGC AATCACACGG TTAAAATCTA CAACACCAAC
CTGGTATTGG TAGCAACTCT GGGGACACCA GGCGAATCAG GCACAGATAA TGCCCACTTC
AACTCGCCGG AAGATGTTGC CGTGGATAGC AATGGCACCA TTTATGTATC CGATGGAGGC
AACCACCGTA TCCAGGTCTT CAACGCCAAT CGTCAGTACG TGCGCACAAT GGGGGAGACT
GGCATCTGGG GCAGCGATTT CGCCCACTTC AACGGGCCGA ACAACCTGTT TGTAGACAGT
GCCAATCGTC TTTACGTAGG CGACGAGTGG AATCACCGCA TTCAAGTCTT TGACGCGAAT
GGCGCCTATT TGACCACAAT CGGGGGAAGT GCAGGCCCCC GAACAGGGCA GTTCCGCGGT
GCGCGGGGTG TGGCGGTGGA CAACGCTGGC AACATCTACG TGGCAGACAG GCTCAACCAC
CGCATCCAGA AATTCGCCCC CGGCGTGCCG GGCTGGAAGC AGGTGAACAT CAACGGGTTT
GGAAATCGAG ATACCACGTT TGTCAGTACG CTGGATGTCT TCGGGGGTTA TCTGTATGCC
GGCACCTGGT CCAGCCAGAT GTGGCGCACT GCGGACGGAC AAACCTGGAG TCAGGTTGCC
CCCTCTACAT GGCCTACTGA TACGGCTGTG TTTGATGCTG AGCCCTTTGG CTCCTATCTG
TACGTAGGCA CGGCGTCCAA TAACGGCGGC GAGATCTGGC GAACCAACGG GATCACCTGG
GAACAGGTGA TTACCAGCGG TTTTGGGATT ACCAATAACT ACGGCATCAA CACGCTGGCA
GTATTCTCAA ATGCCATTTA CGCCGCAACC AGCGCTGAAG ATGGAGTGAT GCAGATTTAC
CGCAGCGCCA GCGGCGATGC CGGGAGTTGG TCACCTGTCG TGACCGACGG CTTCGGTGGC
GGCGGCGTGT GGCAAGATGT GACAATGGAT GTGTACGGCG GTTATCTCTA TTTGGGAATT
GGCCGGGCTG GCGTGGCAGA ACTCTGGCGC ACGAACGATG GAGTTACCTG GTCGCCGGTT
TTCACCGACG GTCTGGCCGC AAATAACACC CATGTCTCTG CAATGGCCGA GTTCAATGGC
GCTTTCTACA TTGGCCTGCG CAATGTCACC ACAGGCGGCG AAGTCTGGCG GACCACCGAT
GGCACAACCT TTACCCGTGT CTTTGATGGC GGACTGGGAG ATCCCAACAA CGGTCGTCCC
TATGGGCTTC AGGTGTTCAA CGGCTACTTG TATCTGGTCT TCAGCAATCT GGTCACAGGG
GCCGAAGTCT GGCGTACATC GGATGGAATG ACCTGGGAGC AGGTTGGCAA TGCCGGCTGG
GGCGACAGCA ACAATGGCTA CGCCGACTAC TTTGACAAAG GCGCGGCCGT TTTCAACAAC
CGCCTCTACA TCGGCACGAC CAACGATGCC AACGGCGGGG AGGTGTGGCT GTTCCTGCAC
AATCGAGTCT ACTTGCCGTT AATCCGGCGT TAA
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| Protein sequence | MKANSLRVIT LLAISILLLS GLATAQGPQP PLPSYPPQGL GLPAEARLGT PEFGKPFIRP
GVPSIGIQSA GTASIPLGQP GLSFRYVQTF GVTETPYIST TTHLNYPYGI GVEGNSIWIG
EMWGNRFLKY ASDGNFQQSF GHAGFAEDYT DTSFWEIADV ATDSDGNIWV VDAASSRVVK
LNSSGKALLT LGKRWESGSD NNRFAYPISV AFDASGNIYV SDGAPWWNRE GGNHRIQVFR
SDGTYLATLG QTGVCGSANN QFCGPRHIAI YGNELYVPDA NNNRVQIFNI SNPASPSYVA
TIGGLNNPSG VAVDDNFIYI ADTWNNRIQT YTRIDRVYIG TIGGEWGSGN NQFRNPTDVV
AMTIGTYPNA ELHLFVADFV NTRVQQFKIT SISPFAFQYV RTYGTTGVPY VTDGYHYNTP
SSVAVAPDGS IYLTEDKGHR LVKLRPDGTP IWIVGAAGVK GDWDASNDRL NNPDDLALDA
NGRVYVADRW HGRVQIYNPD GSYYTTVSGL DCPGGVAIGP NGYLYVADTC NHTVKIYNTN
LVLVATLGTP GESGTDNAHF NSPEDVAVDS NGTIYVSDGG NHRIQVFNAN RQYVRTMGET
GIWGSDFAHF NGPNNLFVDS ANRLYVGDEW NHRIQVFDAN GAYLTTIGGS AGPRTGQFRG
ARGVAVDNAG NIYVADRLNH RIQKFAPGVP GWKQVNINGF GNRDTTFVST LDVFGGYLYA
GTWSSQMWRT ADGQTWSQVA PSTWPTDTAV FDAEPFGSYL YVGTASNNGG EIWRTNGITW
EQVITSGFGI TNNYGINTLA VFSNAIYAAT SAEDGVMQIY RSASGDAGSW SPVVTDGFGG
GGVWQDVTMD VYGGYLYLGI GRAGVAELWR TNDGVTWSPV FTDGLAANNT HVSAMAEFNG
AFYIGLRNVT TGGEVWRTTD GTTFTRVFDG GLGDPNNGRP YGLQVFNGYL YLVFSNLVTG
AEVWRTSDGM TWEQVGNAGW GDSNNGYADY FDKGAAVFNN RLYIGTTNDA NGGEVWLFLH
NRVYLPLIRR
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