More than 300 homologs were found in PanDaTox collection
for query gene Krad_3371 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009664  Krad_3371  histone family protein DNA-binding protein  100 
 
 		 92 aa  179  1e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.557134  normal  0.106715 
 
 
-
 
NC_013169  Ksed_26150  nucleoid DNA-binding protein  68.13 
 
 		 91 aa  130  6e-30  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_2507  histone family protein DNA-binding protein  65.91 
 
 		 93 aa  119  9.999999999999999e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  0.748528  normal  1 
 
 
-
 
NC_013521  Sked_36290  nucleoid DNA-binding protein  60 
 
 		 94 aa  114  6e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2752  histone family protein DNA-binding protein  61.36 
 
 		 93 aa  111  3e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_3268  histone family protein DNA-binding protein  57.78 
 
 		 93 aa  110  8.000000000000001e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_0705  DNA-binding protein HU  55.68 
 
 		 93 aa  106  1e-22  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_010816  BLD_1976  nucleoid DNA-binding protein  55.68 
 
 		 93 aa  106  1e-22  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_3916  histone family protein DNA-binding protein  58.62 
 
 		 94 aa  102  1e-21  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_3718  histone family protein DNA-binding protein  58.62 
 
 		 95 aa  102  2e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012803  Mlut_19160  nucleoid DNA-binding protein  57.78 
 
 		 93 aa  101  3e-21  Micrococcus luteus NCTC 2665  Bacteria  normal  0.34702  n/a   
 
 
-
 
NC_011879  Achl_4472  histone family protein DNA-binding protein  52.27 
 
 		 93 aa  99.8  1e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00595179 
 
 
-
 
NC_013757  Gobs_0298  histone family protein DNA-binding protein  52.22 
 
 		 94 aa  97.8  4e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.406887  n/a   
 
 
-
 
NC_014151  Cfla_1900  histone family protein DNA-binding protein  54.95 
 
 		 93 aa  83.6  9e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.785636  normal  1 
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  47.25 
 
 		 91 aa  83.2  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_011662  Tmz1t_0440  histone family protein DNA-binding protein  47.78 
 
 		 91 aa  83.2  0.000000000000001  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_0525  nucleoid protein Hbs  48.28 
 
 		 91 aa  82.8  0.000000000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00046461  n/a   
 
 
-
 
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  47.25 
 
 		 91 aa  83.2  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  50 
 
 		 90 aa  80.9  0.000000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_011775  BCG9842_0074  DNA-binding protein HU  50 
 
 		 90 aa  80.5  0.000000000000007  Bacillus cereus G9842  Bacteria  unclonable  0.00000000000481156  n/a   
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  45.56 
 
 		 91 aa  80.1  0.000000000000009  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  43.33 
 
 		 91 aa  80.1  0.00000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  46.59 
 
 		 90 aa  79.7  0.00000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  47.73 
 
 		 91 aa  79.7  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal  1 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  46.59 
 
 		 90 aa  78.6  0.00000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_3067  histone family protein DNA-binding protein  46.67 
 
 		 92 aa  79  0.00000000000002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0353619 
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  45.35 
 
 		 92 aa  79  0.00000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal  1 
 
 
-
 
NC_007777  Francci3_3619  histone-like DNA-binding protein  44.57 
 
 		 94 aa  79  0.00000000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_4159  histone family protein DNA-binding protein  47.67 
 
 		 91 aa  79  0.00000000000002  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1115  histone family protein DNA-binding protein  45.65 
 
 		 94 aa  79.3  0.00000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.545347  normal  0.284391 
 
 
-
 
NC_007510  Bcep18194_A3247  histone-like DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia sp. 383  Bacteria  normal  1  normal  0.704477 
 
 
-
 
NC_010551  BamMC406_0065  histone family protein DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  47.73 
 
 		 95 aa  78.6  0.00000000000003  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  48.86 
 
 		 90 aa  78.6  0.00000000000003  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_010508  Bcenmc03_0084  histone family protein DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  44.19 
 
 		 90 aa  78.6  0.00000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008060  Bcen_0005  histone-like DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.129264  n/a   
 
 
-
 
NC_010084  Bmul_0066  histone family protein DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_0055  histone family protein DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0065  histone family protein DNA-binding protein  45.56 
 
 		 92 aa  78.6  0.00000000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  44.32 
 
 		 91 aa  78.2  0.00000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  45.45 
 
 		 91 aa  77.8  0.00000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0390  histone family protein DNA-binding protein  46.67 
 
 		 90 aa  77.8  0.00000000000004  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000165854  n/a   
 
 
-
 
NC_008048  Sala_0799  histone-like DNA-binding protein  47.78 
 
 		 90 aa  77.8  0.00000000000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.0173855 
 
 
-
 
NC_009080  BMA10247_2972  DNA-binding protein HU-alpha  44.44 
 
 		 92 aa  77.4  0.00000000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3397  DNA-binding protein HU, form B  44.44 
 
 		 92 aa  77.4  0.00000000000006  Burkholderia mallei SAVP1  Bacteria  normal  0.218557  n/a   
 
 
-
 
NC_006348  BMA2913  DNA-binding protein HU, form B  44.44 
 
 		 92 aa  77.4  0.00000000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.5361  n/a   
 
 
-
 
NC_009076  BURPS1106A_0004  DNA-binding protein HU-alpha  44.44 
 
 		 92 aa  77.4  0.00000000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3512  histone-like DNA-binding protein  45.45 
 
 		 99 aa  77.4  0.00000000000006  Dechloromonas aromatica RCB  Bacteria  normal  0.848806  normal  0.0177296 
 
 
-
 
NC_009074  BURPS668_0004  DNA-binding protein HU-alpha  44.44 
 
 		 92 aa  77.4  0.00000000000006  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A1629  DNA-binding protein HU, form B  44.44 
 
 		 92 aa  77.4  0.00000000000006  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  45.45 
 
 		 90 aa  77.4  0.00000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_010681  Bphyt_3933  histone family protein DNA-binding protein  44.44 
 
 		 92 aa  77  0.00000000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A4504  DNA-binding protein HU-alpha  44.44 
 
 		 92 aa  77  0.00000000000007  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.806931 
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  46.59 
 
 		 90 aa  77  0.00000000000008  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  44.32 
 
 		 90 aa  77  0.00000000000008  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  44.32 
 
 		 90 aa  77  0.00000000000008  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_008576  Mmc1_2824  nucleoid protein Hbs  45.05 
 
 		 91 aa  76.6  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.669113  normal  1 
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_007651  BTH_I0004  DNA-binding protein HU-alpha  44.44 
 
 		 126 aa  76.6  0.0000000000001  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  44.32 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  44.44 
 
 		 91 aa  76.3  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  45.56 
 
 		 90 aa  76.3  0.0000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_008576  Mmc1_2054  histone family protein DNA-binding protein  45.05 
 
 		 91 aa  76.6  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00333504  normal  0.0104655 
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  46.59 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  44.44 
 
 		 91 aa  76.3  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  47.78 
 
 		 91 aa  76.3  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal  1 
 
 
-
 
NC_006368  lpp1826  hypothetical protein  44.32 
 
 		 92 aa  75.9  0.0000000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1822  hypothetical protein  44.32 
 
 		 92 aa  75.9  0.0000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  44.44 
 
 		 90 aa  75.9  0.0000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_007948  Bpro_1551  histone-like DNA-binding protein  42.22 
 
 		 103 aa  75.9  0.0000000000002  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00525571  normal  0.659297 
 
 
-
 
NC_007972  Rmet_6397  DNA-binding protein Hu-beta  45.65 
 
 		 144 aa  76.3  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  44.32 
 
 		 90 aa  75.5  0.0000000000003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_014248  Aazo_0318  histone family protein DNA-binding protein  47.56 
 
 		 94 aa  75.1  0.0000000000003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  43.96 
 
 		 91 aa  74.7  0.0000000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  43.33 
 
 		 90 aa  74.7  0.0000000000004  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  43.18 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
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